Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.03■□□□□ 0.16
SHFQ7M4L6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.03■□□□□ 0.16
SHFQ7M4L6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.03■□□□□ 0.16
SHFQ7M4L6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.03■□□□□ 0.16
SHFQ7M4L6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.03■□□□□ 0.16
SHFQ7M4L6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.03■□□□□ 0.16
SHFQ7M4L6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
SHFQ7M4L6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SHFQ7M4L6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SHFQ7M4L6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SHFQ7M4L6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHFQ7M4L6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHFQ7M4L6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHFQ7M4L6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHFQ7M4L6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHFQ7M4L6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHFQ7M4L6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHFQ7M4L6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.02■□□□□ 0.16
SHFQ7M4L6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHFQ7M4L6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHFQ7M4L6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SHFQ7M4L6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SHFQ7M4L6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHFQ7M4L6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.02■□□□□ 0.16
SHFQ7M4L6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.02■□□□□ 0.16
SHFQ7M4L6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.02■□□□□ 0.16
SHFQ7M4L6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.02■□□□□ 0.16
SHFQ7M4L6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.02■□□□□ 0.16
SHFQ7M4L6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.02■□□□□ 0.16
SHFQ7M4L6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
SHFQ7M4L6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.02■□□□□ 0.15
SHFQ7M4L6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.02■□□□□ 0.15
SHFQ7M4L6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.02■□□□□ 0.15
SHFQ7M4L6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.02■□□□□ 0.15
SHFQ7M4L6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.02■□□□□ 0.15
SHFQ7M4L6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SHFQ7M4L6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHFQ7M4L6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHFQ7M4L6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHFQ7M4L6 AC106886.4-201ENST00000623557 2502 ntBASIC16.02■□□□□ 0.15
SHFQ7M4L6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SHFQ7M4L6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SHFQ7M4L6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHFQ7M4L6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.02■□□□□ 0.15
SHFQ7M4L6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 HLA-J-201ENST00000462773 1622 ntBASIC16.01■□□□□ 0.15
SHFQ7M4L6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHFQ7M4L6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SHFQ7M4L6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
SHFQ7M4L6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
SHFQ7M4L6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16■□□□□ 0.15
SHFQ7M4L6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SHFQ7M4L6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
SHFQ7M4L6 AC022898.2-201ENST00000616822 1312 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms