Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.43■■□□□ 1.18
KDM3BQ7LBC6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.43■■□□□ 1.18
KDM3BQ7LBC6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
KDM3BQ7LBC6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC22.43■■□□□ 1.18
KDM3BQ7LBC6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC22.43■■□□□ 1.18
KDM3BQ7LBC6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC22.43■■□□□ 1.18
KDM3BQ7LBC6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
KDM3BQ7LBC6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
KDM3BQ7LBC6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC22.43■■□□□ 1.18
KDM3BQ7LBC6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC22.43■■□□□ 1.18
KDM3BQ7LBC6 KRT18P2-201ENST00000447938 1258 ntBASIC22.43■■□□□ 1.18
KDM3BQ7LBC6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC22.43■■□□□ 1.18
KDM3BQ7LBC6 AC139530.3-201ENST00000620344 690 ntBASIC22.43■■□□□ 1.18
KDM3BQ7LBC6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
KDM3BQ7LBC6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 AL139327.4-201ENST00000612362 153 ntBASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.42■■□□□ 1.18
KDM3BQ7LBC6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
KDM3BQ7LBC6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
KDM3BQ7LBC6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KDM3BQ7LBC6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
KDM3BQ7LBC6 RPSAP43-201ENST00000402237 625 ntBASIC22.41■■□□□ 1.18
KDM3BQ7LBC6 CRYGEP-201ENST00000412192 528 ntBASIC22.41■■□□□ 1.18
KDM3BQ7LBC6 GPX1P2-201ENST00000429271 606 ntBASIC22.41■■□□□ 1.18
KDM3BQ7LBC6 AC002347.1-201ENST00000569543 541 ntBASIC22.41■■□□□ 1.18
KDM3BQ7LBC6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC22.41■■□□□ 1.18
KDM3BQ7LBC6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
KDM3BQ7LBC6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.41■■□□□ 1.18
KDM3BQ7LBC6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC22.41■■□□□ 1.18
KDM3BQ7LBC6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
KDM3BQ7LBC6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
KDM3BQ7LBC6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 MIR1233-2-201ENST00000408138 82 ntBASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 MIR1233-1-201ENST00000408722 82 ntBASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM3BQ7LBC6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC22.39■■□□□ 1.18
KDM3BQ7LBC6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
KDM3BQ7LBC6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
KDM3BQ7LBC6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 OR7E47P-204ENST00000575924 449 ntBASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 AL355312.1-201ENST00000407115 2176 ntBASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KDM3BQ7LBC6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms