Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 TSPY26P-202ENST00000565928 3884 ntBASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 KRT8P45-201ENST00000414328 1447 ntBASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 AP000593.1-201ENST00000393668 712 ntBASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 AP000523.1-201ENST00000398242 1049 ntBASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 AC097493.4-201ENST00000641197 219 ntBASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TMEM53Q6P2H8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM53Q6P2H8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM53Q6P2H8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.27■□□□□ 0.19
TMEM53Q6P2H8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM53Q6P2H8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM53Q6P2H8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM53Q6P2H8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM53Q6P2H8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM53Q6P2H8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.27■□□□□ 0.19
TMEM53Q6P2H8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM53Q6P2H8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.27■□□□□ 0.19
TMEM53Q6P2H8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM53Q6P2H8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM53Q6P2H8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM53Q6P2H8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM53Q6P2H8 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 KRT8P7-201ENST00000533003 1432 ntBASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TMEM53Q6P2H8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 AL137013.1-201ENST00000432946 1228 ntBASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms