Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 AC087388.1-201ENST00000571370 1112 ntBASIC16.32■□□□□ 0.2
ZNF544Q6NX49 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF544Q6NX49 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 MYLKP1-201ENST00000509077 1580 ntBASIC16.31■□□□□ 0.2
ZNF544Q6NX49 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.31■□□□□ 0.2
ZNF544Q6NX49 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 AP000593.1-201ENST00000393668 712 ntBASIC16.31■□□□□ 0.2
ZNF544Q6NX49 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 YBX1P2-201ENST00000489612 999 ntBASIC16.31■□□□□ 0.2
ZNF544Q6NX49 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 AC139887.4-201ENST00000607877 719 ntBASIC16.31■□□□□ 0.2
ZNF544Q6NX49 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF544Q6NX49 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 FAM8A6P-201ENST00000407496 1135 ntBASIC16.3■□□□□ 0.2
ZNF544Q6NX49 TSPY5P-201ENST00000426936 936 ntBASIC16.3■□□□□ 0.2
ZNF544Q6NX49 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 AC092647.4-201ENST00000457211 535 ntBASIC16.3■□□□□ 0.2
ZNF544Q6NX49 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 WWOX-216ENST00000569818 525 ntBASIC16.3■□□□□ 0.2
ZNF544Q6NX49 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms