Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD4Q5XG99 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LYSMD4Q5XG99 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LYSMD4Q5XG99 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LYSMD4Q5XG99 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LYSMD4Q5XG99 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LYSMD4Q5XG99 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.27■□□□□ 0.35
LYSMD4Q5XG99 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LYSMD4Q5XG99 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 SPCS2P1-201ENST00000561636 679 ntBASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 AL513210.1-201ENST00000629608 234 ntBASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 PI4KAP1-204ENST00000612579 1703 ntBASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 AC073592.3-201ENST00000625118 1834 ntBASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD4Q5XG99 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 AL139400.1-201ENST00000366220 510 ntBASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms