Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FAM78BQ5VT40 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FAM78BQ5VT40 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FAM78BQ5VT40 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
FAM78BQ5VT40 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FAM78BQ5VT40 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
FAM78BQ5VT40 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.1□□□□□ -0.15
FAM78BQ5VT40 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FAM78BQ5VT40 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.1□□□□□ -0.15
FAM78BQ5VT40 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FAM78BQ5VT40 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FAM78BQ5VT40 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
FAM78BQ5VT40 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.1□□□□□ -0.15
FAM78BQ5VT40 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
FAM78BQ5VT40 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 AL138688.1-201ENST00000624851 1594 ntBASIC14.09□□□□□ -0.15
FAM78BQ5VT40 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 AC068418.2-201ENST00000577309 3703 ntBASIC14.09□□□□□ -0.15
FAM78BQ5VT40 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 FAM197Y1-201ENST00000421178 764 ntBASIC14.09□□□□□ -0.15
FAM78BQ5VT40 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.09□□□□□ -0.15
FAM78BQ5VT40 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 AC008741.2-201ENST00000612792 3115 ntBASIC14.09□□□□□ -0.15
FAM78BQ5VT40 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FAM78BQ5VT40 AC063926.3-201ENST00000624734 5658 ntBASIC14.08□□□□□ -0.15
FAM78BQ5VT40 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
FAM78BQ5VT40 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.08□□□□□ -0.15
FAM78BQ5VT40 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
FAM78BQ5VT40 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
FAM78BQ5VT40 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
FAM78BQ5VT40 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
FAM78BQ5VT40 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.08□□□□□ -0.15
FAM78BQ5VT40 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 CROCCP2-202ENST00000412962 2773 ntBASIC14.08□□□□□ -0.16
FAM78BQ5VT40 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 MIR3180-5-201ENST00000583743 153 ntBASIC14.08□□□□□ -0.16
FAM78BQ5VT40 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 CD177P1-201ENST00000606252 935 ntBASIC14.08□□□□□ -0.16
FAM78BQ5VT40 MIR6786-201ENST00000616843 113 ntBASIC14.08□□□□□ -0.16
FAM78BQ5VT40 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms