Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 AC132938.6-201ENST00000623828 1655 ntBASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 AL162727.3-201ENST00000635661 2787 ntBASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 LINC00602-201ENST00000629776 2065 ntBASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 AC007663.1-201ENST00000438948 1240 ntBASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.04■□□□□ 0.16
LCN1P1Q5VSP4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.03■□□□□ 0.16
LCN1P1Q5VSP4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms