Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 AP002414.4-201ENST00000589764 1148 ntBASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 AC010331.1-201ENST00000611423 582 ntBASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 NPAP1P7-201ENST00000613027 823 ntBASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO1Q2MKA7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 ARMC10P1-201ENST00000313754 855 ntBASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 IGHV3-47-201ENST00000425060 335 ntBASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 AC109462.3-201ENST00000573934 613 ntBASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO1Q2MKA7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms