Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 BX276092.7-203ENST00000637198 1536 ntBASIC21.66■■□□□ 1.06
ATP2B3Q16720 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
ATP2B3Q16720 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP2B3Q16720 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
ATP2B3Q16720 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
ATP2B3Q16720 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2B3Q16720 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.66■■□□□ 1.06
ATP2B3Q16720 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
ATP2B3Q16720 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.66■■□□□ 1.06
ATP2B3Q16720 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP2B3Q16720 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP2B3Q16720 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2B3Q16720 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.66■■□□□ 1.06
ATP2B3Q16720 AC025062.2-201ENST00000605477 670 ntBASIC21.66■■□□□ 1.06
ATP2B3Q16720 AC073592.5-201ENST00000624854 528 ntBASIC21.66■■□□□ 1.06
ATP2B3Q16720 FAM215A-202ENST00000632077 792 ntBASIC21.66■■□□□ 1.06
ATP2B3Q16720 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2B3Q16720 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2B3Q16720 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2B3Q16720 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP2B3Q16720 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP2B3Q16720 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP2B3Q16720 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2B3Q16720 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2B3Q16720 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2B3Q16720 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP2B3Q16720 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP2B3Q16720 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2B3Q16720 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2B3Q16720 AL353593.2-201ENST00000602529 1483 ntBASIC21.65■■□□□ 1.06
ATP2B3Q16720 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2B3Q16720 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2B3Q16720 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP2B3Q16720 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2B3Q16720 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2B3Q16720 AL354751.1-201ENST00000412768 1863 ntBASIC21.65■■□□□ 1.06
ATP2B3Q16720 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
ATP2B3Q16720 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2B3Q16720 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2B3Q16720 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ATP2B3Q16720 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2B3Q16720 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.65■■□□□ 1.06
ATP2B3Q16720 BX005266.1-201ENST00000473402 457 ntBASIC21.65■■□□□ 1.06
ATP2B3Q16720 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2B3Q16720 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.65■■□□□ 1.06
ATP2B3Q16720 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP2B3Q16720 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.65■■□□□ 1.06
ATP2B3Q16720 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
ATP2B3Q16720 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2B3Q16720 AC073592.4-201ENST00000623827 446 ntBASIC21.65■■□□□ 1.06
ATP2B3Q16720 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.65■■□□□ 1.06
ATP2B3Q16720 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2B3Q16720 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2B3Q16720 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.65■■□□□ 1.06
ATP2B3Q16720 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP2B3Q16720 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2B3Q16720 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ATP2B3Q16720 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ATP2B3Q16720 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP2B3Q16720 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ATP2B3Q16720 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP2B3Q16720 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP2B3Q16720 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
ATP2B3Q16720 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
ATP2B3Q16720 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.64■■□□□ 1.06
ATP2B3Q16720 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B3Q16720 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B3Q16720 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B3Q16720 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B3Q16720 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
ATP2B3Q16720 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B3Q16720 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B3Q16720 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.64■■□□□ 1.05
ATP2B3Q16720 AL022342.1-201ENST00000400363 863 ntBASIC21.64■■□□□ 1.05
ATP2B3Q16720 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.64■■□□□ 1.05
ATP2B3Q16720 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.64■■□□□ 1.05
ATP2B3Q16720 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
ATP2B3Q16720 RPS2P1-201ENST00000434010 821 ntBASIC21.64■■□□□ 1.05
ATP2B3Q16720 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP2B3Q16720 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
ATP2B3Q16720 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.64■■□□□ 1.05
ATP2B3Q16720 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP2B3Q16720 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP2B3Q16720 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.64■■□□□ 1.05
ATP2B3Q16720 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
ATP2B3Q16720 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B3Q16720 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.64■■□□□ 1.05
ATP2B3Q16720 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B3Q16720 AC135050.7-201ENST00000624508 2218 ntBASIC21.64■■□□□ 1.05
ATP2B3Q16720 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B3Q16720 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
ATP2B3Q16720 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
ATP2B3Q16720 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B3Q16720 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B3Q16720 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2B3Q16720 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
ATP2B3Q16720 AC243591.1-201ENST00000452967 1364 ntBASIC21.63■■□□□ 1.05
ATP2B3Q16720 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2B3Q16720 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.63■■□□□ 1.05
ATP2B3Q16720 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms