Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRPFP62306 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SNRPFP62306 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRPFP62306 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNRPFP62306 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNRPFP62306 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.21■□□□□ 0.67
SNRPFP62306 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRPFP62306 LYSMD4-203ENST00000378904 2122 ntBASIC19.21■□□□□ 0.67
SNRPFP62306 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNRPFP62306 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
SNRPFP62306 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
SNRPFP62306 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.2■□□□□ 0.66
SNRPFP62306 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRPFP62306 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRPFP62306 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRPFP62306 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.2■□□□□ 0.66
SNRPFP62306 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRPFP62306 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
SNRPFP62306 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNRPFP62306 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.2■□□□□ 0.66
SNRPFP62306 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.2■□□□□ 0.66
SNRPFP62306 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.2■□□□□ 0.66
SNRPFP62306 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRPFP62306 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.2■□□□□ 0.66
SNRPFP62306 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.2■□□□□ 0.66
SNRPFP62306 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.2■□□□□ 0.66
SNRPFP62306 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SNRPFP62306 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.2■□□□□ 0.66
SNRPFP62306 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.2■□□□□ 0.66
SNRPFP62306 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.2■□□□□ 0.66
SNRPFP62306 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
SNRPFP62306 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRPFP62306 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.2■□□□□ 0.66
SNRPFP62306 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.2■□□□□ 0.66
SNRPFP62306 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.2■□□□□ 0.66
SNRPFP62306 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRPFP62306 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRPFP62306 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRPFP62306 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRPFP62306 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SNRPFP62306 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.2■□□□□ 0.66
SNRPFP62306 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRPFP62306 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRPFP62306 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRPFP62306 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
SNRPFP62306 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNRPFP62306 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SNRPFP62306 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRPFP62306 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRPFP62306 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNRPFP62306 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRPFP62306 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
SNRPFP62306 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRPFP62306 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRPFP62306 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRPFP62306 AC003669.1-201ENST00000334569 611 ntBASIC19.19■□□□□ 0.66
SNRPFP62306 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.19■□□□□ 0.66
SNRPFP62306 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRPFP62306 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.19■□□□□ 0.66
SNRPFP62306 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.19■□□□□ 0.66
SNRPFP62306 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.19■□□□□ 0.66
SNRPFP62306 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.19■□□□□ 0.66
SNRPFP62306 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.19■□□□□ 0.66
SNRPFP62306 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.19■□□□□ 0.66
SNRPFP62306 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.19■□□□□ 0.66
SNRPFP62306 AP000867.4-201ENST00000641616 219 ntBASIC19.19■□□□□ 0.66
SNRPFP62306 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SNRPFP62306 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNRPFP62306 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SNRPFP62306 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.19■□□□□ 0.66
SNRPFP62306 PMPCAP1-201ENST00000508114 1576 ntBASIC19.19■□□□□ 0.66
SNRPFP62306 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SNRPFP62306 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SNRPFP62306 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNRPFP62306 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SNRPFP62306 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNRPFP62306 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.18■□□□□ 0.66
SNRPFP62306 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNRPFP62306 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNRPFP62306 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNRPFP62306 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNRPFP62306 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNRPFP62306 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SNRPFP62306 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.18■□□□□ 0.66
SNRPFP62306 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.18■□□□□ 0.66
SNRPFP62306 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.18■□□□□ 0.66
SNRPFP62306 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.18■□□□□ 0.66
SNRPFP62306 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.18■□□□□ 0.66
SNRPFP62306 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.18■□□□□ 0.66
SNRPFP62306 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNRPFP62306 AL591684.3-201ENST00000605187 298 ntBASIC19.18■□□□□ 0.66
SNRPFP62306 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.18■□□□□ 0.66
SNRPFP62306 AL121772.3-201ENST00000610840 674 ntBASIC19.18■□□□□ 0.66
SNRPFP62306 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.18■□□□□ 0.66
SNRPFP62306 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.18■□□□□ 0.66
SNRPFP62306 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.18■□□□□ 0.66
SNRPFP62306 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SNRPFP62306 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNRPFP62306 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNRPFP62306 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms