Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.64■□□□□ 0.25
RAB38P57729 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB38P57729 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB38P57729 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.64■□□□□ 0.25
RAB38P57729 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.64■□□□□ 0.25
RAB38P57729 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAB38P57729 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB38P57729 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB38P57729 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB38P57729 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB38P57729 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RAB38P57729 SIRPAP1-201ENST00000448467 1770 ntBASIC16.64■□□□□ 0.25
RAB38P57729 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB38P57729 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB38P57729 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB38P57729 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB38P57729 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
RAB38P57729 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RAB38P57729 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB38P57729 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB38P57729 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB38P57729 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RAB38P57729 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
RAB38P57729 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB38P57729 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB38P57729 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB38P57729 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB38P57729 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB38P57729 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB38P57729 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.63■□□□□ 0.25
RAB38P57729 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB38P57729 DUSP5P1-201ENST00000441325 1139 ntBASIC16.63■□□□□ 0.25
RAB38P57729 AL732292.2-201ENST00000609649 430 ntBASIC16.63■□□□□ 0.25
RAB38P57729 AC019129.2-201ENST00000609837 1235 ntBASIC16.63■□□□□ 0.25
RAB38P57729 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB38P57729 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB38P57729 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB38P57729 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB38P57729 AL133373.2-201ENST00000623187 2828 ntBASIC16.63■□□□□ 0.25
RAB38P57729 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB38P57729 HLA-J-201ENST00000462773 1622 ntBASIC16.63■□□□□ 0.25
RAB38P57729 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB38P57729 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB38P57729 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB38P57729 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB38P57729 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB38P57729 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB38P57729 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB38P57729 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB38P57729 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB38P57729 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
RAB38P57729 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB38P57729 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB38P57729 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB38P57729 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB38P57729 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB38P57729 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB38P57729 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAB38P57729 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB38P57729 IGHV3-52-201ENST00000519770 353 ntBASIC16.62■□□□□ 0.25
RAB38P57729 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.62■□□□□ 0.25
RAB38P57729 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.62■□□□□ 0.25
RAB38P57729 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB38P57729 AC111152.3-201ENST00000569699 673 ntBASIC16.62■□□□□ 0.25
RAB38P57729 AC109462.3-201ENST00000573934 613 ntBASIC16.62■□□□□ 0.25
RAB38P57729 LINC01711-201ENST00000598340 967 ntBASIC16.62■□□□□ 0.25
RAB38P57729 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RAB38P57729 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RAB38P57729 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB38P57729 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
RAB38P57729 AL355312.1-201ENST00000407115 2176 ntBASIC16.62■□□□□ 0.25
RAB38P57729 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB38P57729 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB38P57729 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB38P57729 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB38P57729 AC133963.1-201ENST00000504166 1679 ntBASIC16.62■□□□□ 0.25
RAB38P57729 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB38P57729 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB38P57729 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB38P57729 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB38P57729 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RAB38P57729 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RAB38P57729 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB38P57729 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAB38P57729 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.61■□□□□ 0.25
RAB38P57729 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB38P57729 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.61■□□□□ 0.25
RAB38P57729 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAB38P57729 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms