Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.19■□□□□ 0.34
PDX1P52945 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PDX1P52945 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.18■□□□□ 0.34
PDX1P52945 ABALON-201ENST00000629058 1903 ntBASIC17.18■□□□□ 0.34
PDX1P52945 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PDX1P52945 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.18■□□□□ 0.34
PDX1P52945 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.18■□□□□ 0.34
PDX1P52945 AC092910.1-201ENST00000482027 1129 ntBASIC17.18■□□□□ 0.34
PDX1P52945 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.18■□□□□ 0.34
PDX1P52945 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PDX1P52945 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.18■□□□□ 0.34
PDX1P52945 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 AC018470.1-201ENST00000624790 3129 ntBASIC17.18■□□□□ 0.34
PDX1P52945 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PDX1P52945 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDX1P52945 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.17■□□□□ 0.34
PDX1P52945 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
PDX1P52945 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
PDX1P52945 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.17■□□□□ 0.34
PDX1P52945 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.17■□□□□ 0.34
PDX1P52945 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.17■□□□□ 0.34
PDX1P52945 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.17■□□□□ 0.34
PDX1P52945 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.17■□□□□ 0.34
PDX1P52945 MED15P5-201ENST00000423150 992 ntBASIC17.17■□□□□ 0.34
PDX1P52945 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PDX1P52945 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.17■□□□□ 0.34
PDX1P52945 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.17■□□□□ 0.34
PDX1P52945 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.17■□□□□ 0.34
PDX1P52945 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.17■□□□□ 0.34
PDX1P52945 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.17■□□□□ 0.34
PDX1P52945 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.17■□□□□ 0.34
PDX1P52945 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.17■□□□□ 0.34
PDX1P52945 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PDX1P52945 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDX1P52945 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.16■□□□□ 0.34
PDX1P52945 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PDX1P52945 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.16■□□□□ 0.34
PDX1P52945 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.16■□□□□ 0.34
PDX1P52945 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.16■□□□□ 0.34
PDX1P52945 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.16■□□□□ 0.34
PDX1P52945 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.16■□□□□ 0.34
PDX1P52945 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.16■□□□□ 0.34
PDX1P52945 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.16■□□□□ 0.34
PDX1P52945 AL356488.2-201ENST00000602755 427 ntBASIC17.16■□□□□ 0.34
PDX1P52945 AC027601.4-201ENST00000611259 610 ntBASIC17.16■□□□□ 0.34
PDX1P52945 AC008735.5-201ENST00000623544 497 ntBASIC17.16■□□□□ 0.34
PDX1P52945 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 AC135776.1-201ENST00000319817 2481 ntBASIC17.16■□□□□ 0.34
PDX1P52945 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.16■□□□□ 0.34
PDX1P52945 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.16■□□□□ 0.34
PDX1P52945 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.16■□□□□ 0.34
PDX1P52945 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms