Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CDK7P50613 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDK7P50613 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK7P50613 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK7P50613 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK7P50613 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CDK7P50613 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDK7P50613 MIR770-201ENST00000390219 98 ntBASIC19.49■□□□□ 0.71
CDK7P50613 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.49■□□□□ 0.71
CDK7P50613 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.49■□□□□ 0.71
CDK7P50613 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.49■□□□□ 0.71
CDK7P50613 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CDK7P50613 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.49■□□□□ 0.71
CDK7P50613 PDPK2P-202ENST00000562415 1191 ntBASIC19.49■□□□□ 0.71
CDK7P50613 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.49■□□□□ 0.71
CDK7P50613 AC093010.1-201ENST00000473625 1624 ntBASIC19.49■□□□□ 0.71
CDK7P50613 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.49■□□□□ 0.71
CDK7P50613 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK7P50613 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.49■□□□□ 0.71
CDK7P50613 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK7P50613 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.49■□□□□ 0.71
CDK7P50613 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDK7P50613 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDK7P50613 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CDK7P50613 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDK7P50613 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDK7P50613 NEFHP1-201ENST00000412845 2629 ntBASIC19.48■□□□□ 0.71
CDK7P50613 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK7P50613 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK7P50613 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDK7P50613 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDK7P50613 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK7P50613 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.48■□□□□ 0.71
CDK7P50613 SIGLEC30P-201ENST00000455569 941 ntBASIC19.48■□□□□ 0.71
CDK7P50613 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.48■□□□□ 0.71
CDK7P50613 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.48■□□□□ 0.71
CDK7P50613 AC096734.2-201ENST00000562054 433 ntBASIC19.48■□□□□ 0.71
CDK7P50613 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.48■□□□□ 0.71
CDK7P50613 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.48■□□□□ 0.71
CDK7P50613 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK7P50613 AC004877.2-201ENST00000623941 599 ntBASIC19.48■□□□□ 0.71
CDK7P50613 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK7P50613 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK7P50613 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.48■□□□□ 0.71
CDK7P50613 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK7P50613 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK7P50613 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDK7P50613 AC093503.3-201ENST00000624917 2352 ntBASIC19.48■□□□□ 0.71
CDK7P50613 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CDK7P50613 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDK7P50613 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK7P50613 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDK7P50613 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK7P50613 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK7P50613 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDK7P50613 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.47■□□□□ 0.71
CDK7P50613 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK7P50613 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK7P50613 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK7P50613 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK7P50613 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.47■□□□□ 0.71
CDK7P50613 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CDK7P50613 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.47■□□□□ 0.71
CDK7P50613 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.47■□□□□ 0.71
CDK7P50613 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.47■□□□□ 0.71
CDK7P50613 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
CDK7P50613 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.47■□□□□ 0.71
CDK7P50613 AC010654.1-201ENST00000615722 808 ntBASIC19.47■□□□□ 0.71
CDK7P50613 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.47■□□□□ 0.71
CDK7P50613 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.47■□□□□ 0.71
CDK7P50613 AL805961.1-202ENST00000641562 540 ntBASIC19.47■□□□□ 0.71
CDK7P50613 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK7P50613 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.47■□□□□ 0.71
CDK7P50613 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDK7P50613 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.47■□□□□ 0.71
CDK7P50613 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK7P50613 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK7P50613 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDK7P50613 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK7P50613 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK7P50613 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDK7P50613 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDK7P50613 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.46■□□□□ 0.71
CDK7P50613 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CDK7P50613 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK7P50613 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK7P50613 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDK7P50613 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDK7P50613 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.46■□□□□ 0.71
CDK7P50613 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.46■□□□□ 0.71
CDK7P50613 RHOQP3-201ENST00000437982 621 ntBASIC19.46■□□□□ 0.71
CDK7P50613 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.46■□□□□ 0.71
CDK7P50613 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.46■□□□□ 0.71
CDK7P50613 AC106028.4-201ENST00000614509 607 ntBASIC19.46■□□□□ 0.71
CDK7P50613 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDK7P50613 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDK7P50613 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK7P50613 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.46■□□□□ 0.71
CDK7P50613 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDK7P50613 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms