Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.79■□□□□ 0.12
LHX2P50458 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX2P50458 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX2P50458 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX2P50458 AC025062.2-201ENST00000605477 670 ntBASIC15.79■□□□□ 0.12
LHX2P50458 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LHX2P50458 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LHX2P50458 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX2P50458 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX2P50458 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX2P50458 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX2P50458 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX2P50458 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX2P50458 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX2P50458 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX2P50458 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX2P50458 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX2P50458 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX2P50458 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.78■□□□□ 0.12
LHX2P50458 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
LHX2P50458 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LHX2P50458 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX2P50458 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LHX2P50458 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LHX2P50458 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.78■□□□□ 0.12
LHX2P50458 AL020989.1-201ENST00000422979 469 ntBASIC15.78■□□□□ 0.12
LHX2P50458 AC005104.2-201ENST00000427818 678 ntBASIC15.78■□□□□ 0.12
LHX2P50458 RPS2P1-201ENST00000434010 821 ntBASIC15.78■□□□□ 0.12
LHX2P50458 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 IGHV3-52-201ENST00000519770 353 ntBASIC15.78■□□□□ 0.12
LHX2P50458 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX2P50458 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LHX2P50458 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.78■□□□□ 0.12
LHX2P50458 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX2P50458 STK25P1-201ENST00000585406 838 ntBASIC15.78■□□□□ 0.12
LHX2P50458 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.78■□□□□ 0.12
LHX2P50458 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.78■□□□□ 0.12
LHX2P50458 MTDHP4-201ENST00000600287 670 ntBASIC15.78■□□□□ 0.12
LHX2P50458 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
LHX2P50458 FAM215A-202ENST00000632077 792 ntBASIC15.78■□□□□ 0.12
LHX2P50458 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.78■□□□□ 0.12
LHX2P50458 AL022326.1-202ENST00000641533 845 ntBASIC15.78■□□□□ 0.12
LHX2P50458 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
LHX2P50458 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX2P50458 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX2P50458 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.78■□□□□ 0.12
LHX2P50458 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX2P50458 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX2P50458 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LHX2P50458 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LHX2P50458 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LHX2P50458 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LHX2P50458 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LHX2P50458 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LHX2P50458 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.77■□□□□ 0.12
LHX2P50458 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
LHX2P50458 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LHX2P50458 REXO1L11P-201ENST00000620964 1927 ntBASIC15.77■□□□□ 0.12
LHX2P50458 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LHX2P50458 AC003669.1-201ENST00000334569 611 ntBASIC15.77■□□□□ 0.12
LHX2P50458 KLF4P1-201ENST00000412782 1185 ntBASIC15.77■□□□□ 0.12
LHX2P50458 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.77■□□□□ 0.12
LHX2P50458 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.77■□□□□ 0.12
LHX2P50458 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LHX2P50458 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LHX2P50458 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LHX2P50458 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.77■□□□□ 0.11
LHX2P50458 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.77■□□□□ 0.11
LHX2P50458 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.77■□□□□ 0.11
LHX2P50458 AC004817.3-201ENST00000602957 2129 ntBASIC15.77■□□□□ 0.11
LHX2P50458 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LHX2P50458 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.77■□□□□ 0.11
LHX2P50458 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.77■□□□□ 0.11
LHX2P50458 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LHX2P50458 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
LHX2P50458 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.77■□□□□ 0.11
LHX2P50458 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.76■□□□□ 0.11
LHX2P50458 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LHX2P50458 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LHX2P50458 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
LHX2P50458 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LHX2P50458 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LHX2P50458 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
LHX2P50458 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms