Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASP4P49662 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASP4P49662 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.3■□□□□ 0.68
CASP4P49662 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.3■□□□□ 0.68
CASP4P49662 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.3■□□□□ 0.68
CASP4P49662 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASP4P49662 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.3■□□□□ 0.68
CASP4P49662 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CASP4P49662 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.3■□□□□ 0.68
CASP4P49662 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.3■□□□□ 0.68
CASP4P49662 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASP4P49662 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASP4P49662 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.3■□□□□ 0.68
CASP4P49662 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASP4P49662 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CASP4P49662 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CASP4P49662 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASP4P49662 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP4P49662 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP4P49662 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP4P49662 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CASP4P49662 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP4P49662 AC108860.2-201ENST00000562760 2183 ntBASIC19.29■□□□□ 0.68
CASP4P49662 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CASP4P49662 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP4P49662 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.29■□□□□ 0.68
CASP4P49662 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP4P49662 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.29■□□□□ 0.68
CASP4P49662 AC005104.2-201ENST00000427818 678 ntBASIC19.29■□□□□ 0.68
CASP4P49662 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.29■□□□□ 0.68
CASP4P49662 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.29■□□□□ 0.68
CASP4P49662 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP4P49662 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.29■□□□□ 0.68
CASP4P49662 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.29■□□□□ 0.68
CASP4P49662 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.29■□□□□ 0.68
CASP4P49662 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.29■□□□□ 0.68
CASP4P49662 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP4P49662 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.29■□□□□ 0.68
CASP4P49662 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.29■□□□□ 0.68
CASP4P49662 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.29■□□□□ 0.68
CASP4P49662 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.29■□□□□ 0.68
CASP4P49662 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.29■□□□□ 0.68
CASP4P49662 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP4P49662 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP4P49662 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.28■□□□□ 0.68
CASP4P49662 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.28■□□□□ 0.68
CASP4P49662 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CASP4P49662 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CASP4P49662 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CASP4P49662 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.28■□□□□ 0.68
CASP4P49662 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.28■□□□□ 0.68
CASP4P49662 AP000867.3-201ENST00000524675 377 ntBASIC19.28■□□□□ 0.68
CASP4P49662 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.28■□□□□ 0.68
CASP4P49662 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.28■□□□□ 0.68
CASP4P49662 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.28■□□□□ 0.68
CASP4P49662 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.28■□□□□ 0.68
CASP4P49662 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.28■□□□□ 0.68
CASP4P49662 AC092329.2-201ENST00000598402 547 ntBASIC19.28■□□□□ 0.68
CASP4P49662 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.28■□□□□ 0.68
CASP4P49662 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.28■□□□□ 0.68
CASP4P49662 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CASP4P49662 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 LTB4R2-202ENST00000528054 3092 ntBASIC19.28■□□□□ 0.68
CASP4P49662 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP4P49662 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.28■□□□□ 0.68
CASP4P49662 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.28■□□□□ 0.68
CASP4P49662 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASP4P49662 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASP4P49662 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASP4P49662 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASP4P49662 SIRPAP1-201ENST00000448467 1770 ntBASIC19.27■□□□□ 0.68
CASP4P49662 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASP4P49662 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASP4P49662 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.27■□□□□ 0.68
CASP4P49662 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.27■□□□□ 0.68
CASP4P49662 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.27■□□□□ 0.68
CASP4P49662 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CASP4P49662 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CASP4P49662 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASP4P49662 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.27■□□□□ 0.68
CASP4P49662 CROCCP2-202ENST00000412962 2773 ntBASIC19.27■□□□□ 0.68
CASP4P49662 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASP4P49662 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms