Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CDKN2AP42771 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKN2AP42771 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CDKN2AP42771 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CDKN2AP42771 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CDKN2AP42771 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CDKN2AP42771 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 AC211429.1-201ENST00000415277 523 ntBASIC15.81■□□□□ 0.12
CDKN2AP42771 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 AC112907.2-201ENST00000448639 330 ntBASIC15.81■□□□□ 0.12
CDKN2AP42771 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CDKN2AP42771 VENTXP5-201ENST00000523979 775 ntBASIC15.81■□□□□ 0.12
CDKN2AP42771 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.81■□□□□ 0.12
CDKN2AP42771 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.81■□□□□ 0.12
CDKN2AP42771 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKN2AP42771 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.81■□□□□ 0.12
CDKN2AP42771 AC005332.3-201ENST00000589904 676 ntBASIC15.81■□□□□ 0.12
CDKN2AP42771 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CDKN2AP42771 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKN2AP42771 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CDKN2AP42771 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDKN2AP42771 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDKN2AP42771 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKN2AP42771 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKN2AP42771 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.8■□□□□ 0.12
CDKN2AP42771 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.8■□□□□ 0.12
CDKN2AP42771 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.8■□□□□ 0.12
CDKN2AP42771 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CDKN2AP42771 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKN2AP42771 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.8■□□□□ 0.12
CDKN2AP42771 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.8■□□□□ 0.12
CDKN2AP42771 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CDKN2AP42771 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CDKN2AP42771 AK4P3-201ENST00000418260 669 ntBASIC15.8■□□□□ 0.12
CDKN2AP42771 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.8■□□□□ 0.12
CDKN2AP42771 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.8■□□□□ 0.12
CDKN2AP42771 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.8■□□□□ 0.12
CDKN2AP42771 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.8■□□□□ 0.12
CDKN2AP42771 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.8■□□□□ 0.12
CDKN2AP42771 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.8■□□□□ 0.12
CDKN2AP42771 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDKN2AP42771 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKN2AP42771 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDKN2AP42771 LYSMD4-203ENST00000378904 2122 ntBASIC15.8■□□□□ 0.12
CDKN2AP42771 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKN2AP42771 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CDKN2AP42771 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDKN2AP42771 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKN2AP42771 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKN2AP42771 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKN2AP42771 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDKN2AP42771 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKN2AP42771 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKN2AP42771 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKN2AP42771 AC099398.1-201ENST00000567919 2776 ntBASIC15.79■□□□□ 0.12
CDKN2AP42771 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CDKN2AP42771 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKN2AP42771 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKN2AP42771 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKN2AP42771 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKN2AP42771 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKN2AP42771 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.79■□□□□ 0.12
CDKN2AP42771 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKN2AP42771 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms