Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC5P40937 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.51■□□□□ 0.71
RFC5P40937 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC5P40937 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC5P40937 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFC5P40937 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFC5P40937 AC005104.2-201ENST00000427818 678 ntBASIC19.51■□□□□ 0.71
RFC5P40937 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RFC5P40937 IGHV3-52-201ENST00000519770 353 ntBASIC19.51■□□□□ 0.71
RFC5P40937 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.51■□□□□ 0.71
RFC5P40937 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.51■□□□□ 0.71
RFC5P40937 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.51■□□□□ 0.71
RFC5P40937 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC5P40937 AC021087.4-201ENST00000563761 564 ntBASIC19.51■□□□□ 0.71
RFC5P40937 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFC5P40937 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC5P40937 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.51■□□□□ 0.71
RFC5P40937 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.51■□□□□ 0.71
RFC5P40937 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC5P40937 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC5P40937 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC5P40937 FZD10-202ENST00000539839 3282 ntBASIC19.51■□□□□ 0.71
RFC5P40937 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RFC5P40937 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC5P40937 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.51■□□□□ 0.71
RFC5P40937 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.51■□□□□ 0.71
RFC5P40937 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.51■□□□□ 0.71
RFC5P40937 HLA-A-201ENST00000376802 1334 ntBASIC19.51■□□□□ 0.71
RFC5P40937 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC5P40937 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC5P40937 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.5■□□□□ 0.71
RFC5P40937 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFC5P40937 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFC5P40937 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC5P40937 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
RFC5P40937 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
RFC5P40937 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC5P40937 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC5P40937 AC003669.1-201ENST00000334569 611 ntBASIC19.5■□□□□ 0.71
RFC5P40937 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFC5P40937 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RFC5P40937 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RFC5P40937 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.5■□□□□ 0.71
RFC5P40937 AP001005.1-201ENST00000571755 1248 ntBASIC19.5■□□□□ 0.71
RFC5P40937 AC148477.8-201ENST00000624298 468 ntBASIC19.5■□□□□ 0.71
RFC5P40937 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.5■□□□□ 0.71
RFC5P40937 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC5P40937 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC5P40937 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC5P40937 AC132938.5-201ENST00000624980 1813 ntBASIC19.5■□□□□ 0.71
RFC5P40937 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.5■□□□□ 0.71
RFC5P40937 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC5P40937 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC5P40937 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC5P40937 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RFC5P40937 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RFC5P40937 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.5■□□□□ 0.71
RFC5P40937 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC5P40937 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.49■□□□□ 0.71
RFC5P40937 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFC5P40937 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC5P40937 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC5P40937 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFC5P40937 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFC5P40937 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.49■□□□□ 0.71
RFC5P40937 AC020763.4-201ENST00000623414 4170 ntBASIC19.49■□□□□ 0.71
RFC5P40937 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFC5P40937 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFC5P40937 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
RFC5P40937 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RFC5P40937 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RFC5P40937 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RFC5P40937 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RFC5P40937 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC5P40937 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.49■□□□□ 0.71
RFC5P40937 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.49■□□□□ 0.71
RFC5P40937 MYCLP1-201ENST00000372451 1075 ntBASIC19.49■□□□□ 0.71
RFC5P40937 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.49■□□□□ 0.71
RFC5P40937 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFC5P40937 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFC5P40937 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFC5P40937 AL031284.1-201ENST00000419297 478 ntBASIC19.49■□□□□ 0.71
RFC5P40937 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC5P40937 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.49■□□□□ 0.71
RFC5P40937 RNA5SP419-201ENST00000515908 135 ntBASIC19.49■□□□□ 0.71
RFC5P40937 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.49■□□□□ 0.71
RFC5P40937 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.49■□□□□ 0.71
RFC5P40937 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFC5P40937 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC5P40937 BCL2-203ENST00000589955 5011 ntBASIC19.49■□□□□ 0.71
RFC5P40937 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFC5P40937 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC5P40937 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC5P40937 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC5P40937 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC5P40937 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RFC5P40937 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFC5P40937 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFC5P40937 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFC5P40937 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms