Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.05■□□□□ 0.16
GDF1P27539 COX5BP2-201ENST00000392354 334 ntBASIC16.05■□□□□ 0.16
GDF1P27539 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 AC103564.2-201ENST00000432853 1299 ntBASIC16.05■□□□□ 0.16
GDF1P27539 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.05■□□□□ 0.16
GDF1P27539 SLC25A6P4-201ENST00000586535 553 ntBASIC16.05■□□□□ 0.16
GDF1P27539 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.05■□□□□ 0.16
GDF1P27539 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.05■□□□□ 0.16
GDF1P27539 BICD1-207ENST00000551848 1962 ntBASIC16.05■□□□□ 0.16
GDF1P27539 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
GDF1P27539 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.05■□□□□ 0.16
GDF1P27539 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.05■□□□□ 0.16
GDF1P27539 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.05■□□□□ 0.16
GDF1P27539 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDF1P27539 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.04■□□□□ 0.16
GDF1P27539 BX276092.7-203ENST00000637198 1536 ntBASIC16.04■□□□□ 0.16
GDF1P27539 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.04■□□□□ 0.16
GDF1P27539 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
GDF1P27539 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.04■□□□□ 0.16
GDF1P27539 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.04■□□□□ 0.16
GDF1P27539 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.04■□□□□ 0.16
GDF1P27539 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
GDF1P27539 MRPL3P1-201ENST00000400109 1033 ntBASIC16.04■□□□□ 0.16
GDF1P27539 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.04■□□□□ 0.16
GDF1P27539 DDX43P3-201ENST00000441064 443 ntBASIC16.04■□□□□ 0.16
GDF1P27539 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.04■□□□□ 0.16
GDF1P27539 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
GDF1P27539 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.04■□□□□ 0.16
GDF1P27539 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 AL773604.1-201ENST00000617417 272 ntBASIC16.04■□□□□ 0.16
GDF1P27539 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.04■□□□□ 0.16
GDF1P27539 SIRPAP1-201ENST00000448467 1770 ntBASIC16.04■□□□□ 0.16
GDF1P27539 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.04■□□□□ 0.16
GDF1P27539 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.04■□□□□ 0.16
GDF1P27539 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.04■□□□□ 0.16
GDF1P27539 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDF1P27539 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
GDF1P27539 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
GDF1P27539 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
GDF1P27539 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.03■□□□□ 0.16
GDF1P27539 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.03■□□□□ 0.16
GDF1P27539 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.03■□□□□ 0.16
GDF1P27539 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
GDF1P27539 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.03■□□□□ 0.16
GDF1P27539 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDF1P27539 KRT18P67-201ENST00000432816 1264 ntBASIC16.03■□□□□ 0.16
GDF1P27539 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
GDF1P27539 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms