Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ACKR3P25106 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.41■□□□□ 0.06
ACKR3P25106 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ACKR3P25106 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ACKR3P25106 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.41■□□□□ 0.06
ACKR3P25106 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.41■□□□□ 0.06
ACKR3P25106 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ACKR3P25106 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ACKR3P25106 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 AL645608.8-201ENST00000606034 2086 ntBASIC15.4■□□□□ 0.06
ACKR3P25106 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.4■□□□□ 0.06
ACKR3P25106 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ACKR3P25106 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.4■□□□□ 0.06
ACKR3P25106 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ACKR3P25106 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.4■□□□□ 0.06
ACKR3P25106 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.4■□□□□ 0.06
ACKR3P25106 AP003733.1-201ENST00000491725 852 ntBASIC15.4■□□□□ 0.06
ACKR3P25106 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.4■□□□□ 0.06
ACKR3P25106 ZNF444P1-201ENST00000559497 298 ntBASIC15.4■□□□□ 0.06
ACKR3P25106 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.4■□□□□ 0.06
ACKR3P25106 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.4■□□□□ 0.06
ACKR3P25106 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.4■□□□□ 0.06
ACKR3P25106 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.4■□□□□ 0.06
ACKR3P25106 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.4■□□□□ 0.06
ACKR3P25106 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.4■□□□□ 0.06
ACKR3P25106 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.4■□□□□ 0.06
ACKR3P25106 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.4■□□□□ 0.06
ACKR3P25106 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.4■□□□□ 0.06
ACKR3P25106 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ACKR3P25106 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
ACKR3P25106 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACKR3P25106 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ACKR3P25106 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ACKR3P25106 AC084018.2-201ENST00000613093 2607 ntBASIC15.39■□□□□ 0.05
ACKR3P25106 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ACKR3P25106 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.39■□□□□ 0.05
ACKR3P25106 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ACKR3P25106 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ACKR3P25106 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.39■□□□□ 0.05
ACKR3P25106 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ACKR3P25106 RCN1P1-201ENST00000400413 996 ntBASIC15.39■□□□□ 0.05
ACKR3P25106 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.39■□□□□ 0.05
ACKR3P25106 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.39■□□□□ 0.05
ACKR3P25106 TSPY12P-201ENST00000421279 868 ntBASIC15.39■□□□□ 0.05
ACKR3P25106 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.39■□□□□ 0.05
ACKR3P25106 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.39■□□□□ 0.05
ACKR3P25106 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.39■□□□□ 0.05
ACKR3P25106 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.39■□□□□ 0.05
ACKR3P25106 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.39■□□□□ 0.05
ACKR3P25106 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.39■□□□□ 0.05
ACKR3P25106 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.39■□□□□ 0.05
ACKR3P25106 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.39■□□□□ 0.05
ACKR3P25106 AC009154.2-201ENST00000621177 724 ntBASIC15.39■□□□□ 0.05
ACKR3P25106 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.39■□□□□ 0.05
ACKR3P25106 PCDHA12-202ENST00000613593 2588 ntBASIC15.39■□□□□ 0.05
ACKR3P25106 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ACKR3P25106 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.39■□□□□ 0.05
ACKR3P25106 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ACKR3P25106 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ACKR3P25106 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.39■□□□□ 0.05
ACKR3P25106 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ACKR3P25106 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ACKR3P25106 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.39■□□□□ 0.05
ACKR3P25106 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ACKR3P25106 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.39■□□□□ 0.05
ACKR3P25106 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ACKR3P25106 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
ACKR3P25106 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ACKR3P25106 AC133963.1-201ENST00000504166 1679 ntBASIC15.38■□□□□ 0.05
ACKR3P25106 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
ACKR3P25106 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.38■□□□□ 0.05
ACKR3P25106 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.38■□□□□ 0.05
ACKR3P25106 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ACKR3P25106 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.38■□□□□ 0.05
ACKR3P25106 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
ACKR3P25106 LINC00304-203ENST00000565008 1864 ntBASIC15.38■□□□□ 0.05
ACKR3P25106 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.38■□□□□ 0.05
ACKR3P25106 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ACKR3P25106 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.38■□□□□ 0.05
ACKR3P25106 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ACKR3P25106 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
ACKR3P25106 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ACKR3P25106 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms