Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.54■■□□□ 1.04
KCNA3P22001 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KCNA3P22001 AC243562.1-201ENST00000560672 389 ntBASIC21.54■■□□□ 1.04
KCNA3P22001 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC21.54■■□□□ 1.04
KCNA3P22001 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.54■■□□□ 1.04
KCNA3P22001 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
KCNA3P22001 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.54■■□□□ 1.04
KCNA3P22001 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KCNA3P22001 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNA3P22001 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.54■■□□□ 1.04
KCNA3P22001 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNA3P22001 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNA3P22001 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNA3P22001 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNA3P22001 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNA3P22001 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNA3P22001 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNA3P22001 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.53■■□□□ 1.04
KCNA3P22001 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.53■■□□□ 1.04
KCNA3P22001 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.53■■□□□ 1.04
KCNA3P22001 HNRNPA1P40-201ENST00000426371 1278 ntBASIC21.53■■□□□ 1.04
KCNA3P22001 AL592309.1-201ENST00000443127 649 ntBASIC21.53■■□□□ 1.04
KCNA3P22001 KLF2P3-201ENST00000451977 1087 ntBASIC21.53■■□□□ 1.04
KCNA3P22001 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNA3P22001 AC079140.1-201ENST00000508039 487 ntBASIC21.53■■□□□ 1.04
KCNA3P22001 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.53■■□□□ 1.04
KCNA3P22001 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNA3P22001 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
KCNA3P22001 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.53■■□□□ 1.04
KCNA3P22001 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.53■■□□□ 1.04
KCNA3P22001 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNA3P22001 HFE2-206ENST00000634927 506 ntTSL 4 BASIC21.53■■□□□ 1.04
KCNA3P22001 AC100803.2-201ENST00000562459 1963 ntBASIC21.53■■□□□ 1.04
KCNA3P22001 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KCNA3P22001 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNA3P22001 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNA3P22001 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
KCNA3P22001 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNA3P22001 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.53■■□□□ 1.04
KCNA3P22001 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KCNA3P22001 ANO7L1-203ENST00000602586 1720 ntBASIC21.52■■□□□ 1.04
KCNA3P22001 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.52■■□□□ 1.04
KCNA3P22001 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNA3P22001 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.52■■□□□ 1.04
KCNA3P22001 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
KCNA3P22001 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.52■■□□□ 1.04
KCNA3P22001 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
KCNA3P22001 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNA3P22001 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.52■■□□□ 1.04
KCNA3P22001 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.52■■□□□ 1.04
KCNA3P22001 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.52■■□□□ 1.04
KCNA3P22001 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.52■■□□□ 1.04
KCNA3P22001 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
KCNA3P22001 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNA3P22001 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
KCNA3P22001 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
KCNA3P22001 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.52■■□□□ 1.03
KCNA3P22001 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNA3P22001 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KCNA3P22001 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNA3P22001 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.51■■□□□ 1.03
KCNA3P22001 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KCNA3P22001 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNA3P22001 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
KCNA3P22001 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
KCNA3P22001 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNA3P22001 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.51■■□□□ 1.03
KCNA3P22001 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
KCNA3P22001 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.51■■□□□ 1.03
KCNA3P22001 SPDYE11-202ENST00000450699 704 ntBASIC21.51■■□□□ 1.03
KCNA3P22001 FAM86C2P-203ENST00000528684 1004 ntBASIC21.51■■□□□ 1.03
KCNA3P22001 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.51■■□□□ 1.03
KCNA3P22001 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.51■■□□□ 1.03
KCNA3P22001 SPDYE9P-201ENST00000570642 692 ntBASIC21.51■■□□□ 1.03
KCNA3P22001 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.51■■□□□ 1.03
KCNA3P22001 SPDYE10P-202ENST00000612005 668 ntBASIC21.51■■□□□ 1.03
KCNA3P22001 SPDYE8P-202ENST00000612377 668 ntBASIC21.51■■□□□ 1.03
KCNA3P22001 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.51■■□□□ 1.03
KCNA3P22001 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNA3P22001 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
KCNA3P22001 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KCNA3P22001 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNA3P22001 AFG3L1P-217ENST00000557444 2447 ntBASIC21.5■■□□□ 1.03
KCNA3P22001 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KCNA3P22001 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNA3P22001 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KCNA3P22001 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.5■■□□□ 1.03
KCNA3P22001 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNA3P22001 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNA3P22001 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNA3P22001 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNA3P22001 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNA3P22001 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
KCNA3P22001 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KCNA3P22001 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KCNA3P22001 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.5■■□□□ 1.03
KCNA3P22001 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KCNA3P22001 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.5■■□□□ 1.03
KCNA3P22001 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
KCNA3P22001 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms