Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC1P18887 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC1P18887 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.67■□□□□ 0.42
XRCC1P18887 AL450487.1-201ENST00000426799 995 ntBASIC17.67■□□□□ 0.42
XRCC1P18887 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC1P18887 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC1P18887 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.67■□□□□ 0.42
XRCC1P18887 AP000867.3-201ENST00000524675 377 ntBASIC17.67■□□□□ 0.42
XRCC1P18887 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC1P18887 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC1P18887 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC1P18887 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC1P18887 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.67■□□□□ 0.42
XRCC1P18887 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC1P18887 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.67■□□□□ 0.42
XRCC1P18887 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.67■□□□□ 0.42
XRCC1P18887 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC1P18887 FLJ13224-201ENST00000313737 1514 ntBASIC17.67■□□□□ 0.42
XRCC1P18887 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.66■□□□□ 0.42
XRCC1P18887 AC233702.3-201ENST00000578656 1387 ntBASIC17.66■□□□□ 0.42
XRCC1P18887 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.66■□□□□ 0.42
XRCC1P18887 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.66■□□□□ 0.42
XRCC1P18887 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
XRCC1P18887 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.66■□□□□ 0.42
XRCC1P18887 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.66■□□□□ 0.42
XRCC1P18887 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
XRCC1P18887 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
XRCC1P18887 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.66■□□□□ 0.42
XRCC1P18887 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.66■□□□□ 0.42
XRCC1P18887 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.66■□□□□ 0.42
XRCC1P18887 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 PRELID1P1-202ENST00000567272 903 ntBASIC17.66■□□□□ 0.42
XRCC1P18887 Z69720.1-201ENST00000601483 472 ntBASIC17.66■□□□□ 0.42
XRCC1P18887 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.66■□□□□ 0.42
XRCC1P18887 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
XRCC1P18887 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.66■□□□□ 0.42
XRCC1P18887 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
XRCC1P18887 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.66■□□□□ 0.42
XRCC1P18887 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.66■□□□□ 0.42
XRCC1P18887 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.66■□□□□ 0.42
XRCC1P18887 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XRCC1P18887 GMCL1P1-201ENST00000463439 1581 ntBASIC17.66■□□□□ 0.42
XRCC1P18887 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC1P18887 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC1P18887 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC1P18887 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC1P18887 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
XRCC1P18887 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC1P18887 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.65■□□□□ 0.42
XRCC1P18887 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
XRCC1P18887 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC1P18887 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
XRCC1P18887 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC1P18887 AC246785.2-201ENST00000432512 513 ntBASIC17.65■□□□□ 0.42
XRCC1P18887 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
XRCC1P18887 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.65■□□□□ 0.42
XRCC1P18887 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC1P18887 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.65■□□□□ 0.42
XRCC1P18887 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.65■□□□□ 0.42
XRCC1P18887 AL353801.3-201ENST00000609898 542 ntBASIC17.65■□□□□ 0.42
XRCC1P18887 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC1P18887 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.65■□□□□ 0.42
XRCC1P18887 AC012313.10-201ENST00000623509 926 ntBASIC17.65■□□□□ 0.42
XRCC1P18887 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC1P18887 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC1P18887 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.65■□□□□ 0.42
XRCC1P18887 AC141586.5-201ENST00000624546 2050 ntBASIC17.65■□□□□ 0.42
XRCC1P18887 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
XRCC1P18887 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
XRCC1P18887 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
XRCC1P18887 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC1P18887 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XRCC1P18887 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms