Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDGFRAP16234 AC133963.1-201ENST00000504166 1679 ntBASIC18.58■□□□□ 0.57
PDGFRAP16234 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFRAP16234 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
PDGFRAP16234 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFRAP16234 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFRAP16234 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFRAP16234 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.58■□□□□ 0.56
PDGFRAP16234 TOB2P1-201ENST00000469761 992 ntBASIC18.58■□□□□ 0.56
PDGFRAP16234 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFRAP16234 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFRAP16234 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFRAP16234 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PDGFRAP16234 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFRAP16234 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.58■□□□□ 0.56
PDGFRAP16234 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFRAP16234 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFRAP16234 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PDGFRAP16234 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFRAP16234 LINC00304-203ENST00000565008 1864 ntBASIC18.58■□□□□ 0.56
PDGFRAP16234 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFRAP16234 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFRAP16234 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.58■□□□□ 0.56
PDGFRAP16234 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFRAP16234 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFRAP16234 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFRAP16234 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFRAP16234 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFRAP16234 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.57■□□□□ 0.56
PDGFRAP16234 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFRAP16234 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
PDGFRAP16234 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PDGFRAP16234 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFRAP16234 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.57■□□□□ 0.56
PDGFRAP16234 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.57■□□□□ 0.56
PDGFRAP16234 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PDGFRAP16234 AC246785.2-201ENST00000432512 513 ntBASIC18.57■□□□□ 0.56
PDGFRAP16234 DRAXINP1-201ENST00000437611 948 ntBASIC18.57■□□□□ 0.56
PDGFRAP16234 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.57■□□□□ 0.56
PDGFRAP16234 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFRAP16234 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.57■□□□□ 0.56
PDGFRAP16234 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.57■□□□□ 0.56
PDGFRAP16234 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.57■□□□□ 0.56
PDGFRAP16234 AC005336.2-201ENST00000593183 939 ntBASIC18.57■□□□□ 0.56
PDGFRAP16234 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.57■□□□□ 0.56
PDGFRAP16234 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFRAP16234 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.57■□□□□ 0.56
PDGFRAP16234 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.57■□□□□ 0.56
PDGFRAP16234 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.57■□□□□ 0.56
PDGFRAP16234 AC012313.10-201ENST00000623509 926 ntBASIC18.57■□□□□ 0.56
PDGFRAP16234 LINC01451-201ENST00000623792 534 ntBASIC18.57■□□□□ 0.56
PDGFRAP16234 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFRAP16234 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFRAP16234 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFRAP16234 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFRAP16234 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.57■□□□□ 0.56
PDGFRAP16234 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFRAP16234 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.57■□□□□ 0.56
PDGFRAP16234 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFRAP16234 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PDGFRAP16234 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFRAP16234 AC125634.1-201ENST00000438758 1403 ntBASIC18.57■□□□□ 0.56
PDGFRAP16234 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFRAP16234 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PDGFRAP16234 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFRAP16234 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFRAP16234 AC010460.3-201ENST00000511359 1579 ntBASIC18.56■□□□□ 0.56
PDGFRAP16234 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFRAP16234 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
PDGFRAP16234 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFRAP16234 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 VENTXP7-201ENST00000475503 772 ntBASIC18.56■□□□□ 0.56
PDGFRAP16234 AC091607.1-201ENST00000490318 1060 ntBASIC18.56■□□□□ 0.56
PDGFRAP16234 AP000867.3-201ENST00000524675 377 ntBASIC18.56■□□□□ 0.56
PDGFRAP16234 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFRAP16234 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFRAP16234 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PDGFRAP16234 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PDGFRAP16234 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFRAP16234 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFRAP16234 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PDGFRAP16234 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.56■□□□□ 0.56
PDGFRAP16234 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFRAP16234 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms