Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
RARBP10826 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARBP10826 PHGDH-209ENST00000641074 1780 ntBASIC19.75■□□□□ 0.75
RARBP10826 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARBP10826 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RARBP10826 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARBP10826 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARBP10826 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARBP10826 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.75■□□□□ 0.75
RARBP10826 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARBP10826 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RARBP10826 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RARBP10826 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.75■□□□□ 0.75
RARBP10826 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.75■□□□□ 0.75
RARBP10826 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.75■□□□□ 0.75
RARBP10826 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.75■□□□□ 0.75
RARBP10826 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.75■□□□□ 0.75
RARBP10826 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RARBP10826 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
RARBP10826 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.75■□□□□ 0.75
RARBP10826 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.75■□□□□ 0.75
RARBP10826 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.75■□□□□ 0.75
RARBP10826 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.75■□□□□ 0.75
RARBP10826 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.75■□□□□ 0.75
RARBP10826 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARBP10826 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RARBP10826 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARBP10826 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.75■□□□□ 0.75
RARBP10826 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.74■□□□□ 0.75
RARBP10826 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.74■□□□□ 0.75
RARBP10826 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RARBP10826 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.74■□□□□ 0.75
RARBP10826 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.74■□□□□ 0.75
RARBP10826 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.74■□□□□ 0.75
RARBP10826 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
RARBP10826 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.74■□□□□ 0.75
RARBP10826 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.74■□□□□ 0.75
RARBP10826 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
RARBP10826 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.74■□□□□ 0.75
RARBP10826 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.74■□□□□ 0.75
RARBP10826 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.74■□□□□ 0.75
RARBP10826 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.74■□□□□ 0.75
RARBP10826 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.74■□□□□ 0.75
RARBP10826 AC010654.1-201ENST00000615722 808 ntBASIC19.74■□□□□ 0.75
RARBP10826 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RARBP10826 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RARBP10826 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RARBP10826 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.74■□□□□ 0.75
RARBP10826 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.74■□□□□ 0.75
RARBP10826 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.74■□□□□ 0.75
RARBP10826 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARBP10826 AC126763.1-201ENST00000552015 2118 ntBASIC19.73■□□□□ 0.75
RARBP10826 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RARBP10826 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARBP10826 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RARBP10826 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARBP10826 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARBP10826 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
RARBP10826 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.73■□□□□ 0.75
RARBP10826 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RARBP10826 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARBP10826 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARBP10826 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARBP10826 MRPL20P1-201ENST00000400819 433 ntBASIC19.73■□□□□ 0.75
RARBP10826 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.73■□□□□ 0.75
RARBP10826 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.73■□□□□ 0.75
RARBP10826 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
RARBP10826 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.73■□□□□ 0.75
RARBP10826 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.73■□□□□ 0.75
RARBP10826 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.73■□□□□ 0.75
RARBP10826 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.73■□□□□ 0.75
RARBP10826 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.73■□□□□ 0.75
RARBP10826 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RARBP10826 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.73■□□□□ 0.75
RARBP10826 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
RARBP10826 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARBP10826 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARBP10826 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.73■□□□□ 0.75
RARBP10826 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARBP10826 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms