Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.84□□□□□ -0.19
CD28P10747 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.84□□□□□ -0.19
CD28P10747 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
CD28P10747 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.84□□□□□ -0.19
CD28P10747 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 HLA-J-201ENST00000462773 1622 ntBASIC13.84□□□□□ -0.19
CD28P10747 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.84□□□□□ -0.19
CD28P10747 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CD28P10747 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.84□□□□□ -0.19
CD28P10747 KRT18P13-201ENST00000400056 1290 ntBASIC13.84□□□□□ -0.19
CD28P10747 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.84□□□□□ -0.19
CD28P10747 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CD28P10747 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.84□□□□□ -0.19
CD28P10747 AC092865.5-201ENST00000545435 363 ntBASIC13.84□□□□□ -0.19
CD28P10747 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.84□□□□□ -0.19
CD28P10747 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.84□□□□□ -0.19
CD28P10747 MTDHP4-201ENST00000600287 670 ntBASIC13.84□□□□□ -0.19
CD28P10747 AC025062.2-201ENST00000605477 670 ntBASIC13.84□□□□□ -0.19
CD28P10747 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CD28P10747 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CD28P10747 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.84□□□□□ -0.19
CD28P10747 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.84□□□□□ -0.19
CD28P10747 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
CD28P10747 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 CROCCP3-202ENST00000420820 1947 ntBASIC13.84□□□□□ -0.19
CD28P10747 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD28P10747 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
CD28P10747 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CD28P10747 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CD28P10747 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.83□□□□□ -0.19
CD28P10747 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CD28P10747 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CD28P10747 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.83□□□□□ -0.2
CD28P10747 AC104109.2-201ENST00000602919 1418 ntBASIC13.83□□□□□ -0.2
CD28P10747 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CD28P10747 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CD28P10747 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.83□□□□□ -0.2
CD28P10747 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.83□□□□□ -0.2
CD28P10747 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.83□□□□□ -0.2
CD28P10747 AC012640.2-201ENST00000561606 901 ntBASIC13.83□□□□□ -0.2
CD28P10747 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.83□□□□□ -0.2
CD28P10747 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.83□□□□□ -0.2
CD28P10747 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CD28P10747 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.83□□□□□ -0.2
CD28P10747 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.83□□□□□ -0.2
CD28P10747 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 PMS2P7-201ENST00000506558 1336 ntBASIC13.83□□□□□ -0.2
CD28P10747 AC097374.2-201ENST00000618617 1306 ntBASIC13.83□□□□□ -0.2
CD28P10747 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD28P10747 AC093010.1-201ENST00000473625 1624 ntBASIC13.82□□□□□ -0.2
CD28P10747 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.82□□□□□ -0.2
CD28P10747 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CD28P10747 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.82□□□□□ -0.2
CD28P10747 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.82□□□□□ -0.2
CD28P10747 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.82□□□□□ -0.2
CD28P10747 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CD28P10747 AC098831.1-202ENST00000438821 336 ntBASIC13.82□□□□□ -0.2
CD28P10747 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms