Protein–RNA interactions for Protein: P0CW27

CCDC166, Coiled-coil domain-containing protein 166, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC166P0CW27 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC166P0CW27 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC166P0CW27 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC166P0CW27 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC166P0CW27 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC166P0CW27 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC166P0CW27 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC166P0CW27 AL138688.1-201ENST00000624851 1594 ntBASIC17.62■□□□□ 0.41
CCDC166P0CW27 AL023806.1-201ENST00000603994 1649 ntBASIC17.62■□□□□ 0.41
CCDC166P0CW27 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC166P0CW27 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC166P0CW27 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC166P0CW27 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC166P0CW27 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC166P0CW27 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC166P0CW27 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC166P0CW27 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC166P0CW27 TERF1P1-201ENST00000311003 1181 ntBASIC17.62■□□□□ 0.41
CCDC166P0CW27 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC166P0CW27 BX664615.1-201ENST00000443558 458 ntBASIC17.62■□□□□ 0.41
CCDC166P0CW27 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC166P0CW27 YBX1P2-201ENST00000489612 999 ntBASIC17.62■□□□□ 0.41
CCDC166P0CW27 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CCDC166P0CW27 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC166P0CW27 AC073912.3-201ENST00000624414 853 ntBASIC17.62■□□□□ 0.41
CCDC166P0CW27 AC097493.4-201ENST00000641197 219 ntBASIC17.62■□□□□ 0.41
CCDC166P0CW27 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC166P0CW27 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC166P0CW27 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC166P0CW27 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC166P0CW27 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC166P0CW27 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC166P0CW27 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC166P0CW27 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC166P0CW27 HLA-J-201ENST00000462773 1622 ntBASIC17.61■□□□□ 0.41
CCDC166P0CW27 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC166P0CW27 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC166P0CW27 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC166P0CW27 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC166P0CW27 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC166P0CW27 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC166P0CW27 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC166P0CW27 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC166P0CW27 REXO1L11P-201ENST00000620964 1927 ntBASIC17.61■□□□□ 0.41
CCDC166P0CW27 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC166P0CW27 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC166P0CW27 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC166P0CW27 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC166P0CW27 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC166P0CW27 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC166P0CW27 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC166P0CW27 FAM8A6P-201ENST00000407496 1135 ntBASIC17.61■□□□□ 0.41
CCDC166P0CW27 AC092597.1-201ENST00000487352 616 ntBASIC17.61■□□□□ 0.41
CCDC166P0CW27 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC166P0CW27 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC166P0CW27 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
CCDC166P0CW27 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC166P0CW27 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CCDC166P0CW27 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC166P0CW27 AC080080.1-201ENST00000625121 2420 ntBASIC17.61■□□□□ 0.41
CCDC166P0CW27 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC166P0CW27 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC166P0CW27 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC166P0CW27 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC166P0CW27 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC166P0CW27 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC166P0CW27 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC166P0CW27 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC166P0CW27 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC166P0CW27 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC166P0CW27 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC166P0CW27 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC166P0CW27 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC166P0CW27 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC166P0CW27 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC166P0CW27 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC166P0CW27 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC166P0CW27 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC166P0CW27 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC166P0CW27 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC166P0CW27 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC166P0CW27 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC166P0CW27 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC166P0CW27 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms