Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AL390955.2-201ENST00000603032 514 ntBASIC17.66■□□□□ 0.42
COL4A2P08572 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.66■□□□□ 0.42
COL4A2P08572 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A2P08572 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A2P08572 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A2P08572 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A2P08572 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A2P08572 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.65■□□□□ 0.42
COL4A2P08572 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COL4A2P08572 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A2P08572 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A2P08572 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COL4A2P08572 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
COL4A2P08572 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.65■□□□□ 0.42
COL4A2P08572 AC140658.5-201ENST00000438532 169 ntBASIC17.65■□□□□ 0.42
COL4A2P08572 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A2P08572 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.65■□□□□ 0.42
COL4A2P08572 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.65■□□□□ 0.42
COL4A2P08572 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.65■□□□□ 0.42
COL4A2P08572 AC092364.2-202ENST00000597012 1073 ntBASIC17.65■□□□□ 0.42
COL4A2P08572 AJ011932.1-201ENST00000621707 465 ntBASIC17.65■□□□□ 0.42
COL4A2P08572 Z92544.3-201ENST00000624747 417 ntBASIC17.65■□□□□ 0.42
COL4A2P08572 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.65■□□□□ 0.42
COL4A2P08572 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.65■□□□□ 0.42
COL4A2P08572 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A2P08572 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A2P08572 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.65■□□□□ 0.42
COL4A2P08572 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
COL4A2P08572 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
COL4A2P08572 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.65■□□□□ 0.42
COL4A2P08572 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.64■□□□□ 0.42
COL4A2P08572 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
COL4A2P08572 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A2P08572 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
COL4A2P08572 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COL4A2P08572 KRT18P32-201ENST00000424695 1287 ntBASIC17.64■□□□□ 0.41
COL4A2P08572 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.64■□□□□ 0.41
COL4A2P08572 KRT8P48-201ENST00000515599 1220 ntBASIC17.64■□□□□ 0.41
COL4A2P08572 AC112191.1-201ENST00000523689 701 ntBASIC17.64■□□□□ 0.41
COL4A2P08572 AC004835.2-201ENST00000603762 682 ntBASIC17.64■□□□□ 0.41
COL4A2P08572 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A2P08572 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COL4A2P08572 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.64■□□□□ 0.41
COL4A2P08572 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A2P08572 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A2P08572 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
COL4A2P08572 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A2P08572 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
COL4A2P08572 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A2P08572 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.64■□□□□ 0.41
COL4A2P08572 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A2P08572 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A2P08572 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.64■□□□□ 0.41
COL4A2P08572 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A2P08572 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A2P08572 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.64■□□□□ 0.41
COL4A2P08572 AC135776.1-201ENST00000319817 2481 ntBASIC17.64■□□□□ 0.41
COL4A2P08572 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A2P08572 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.64■□□□□ 0.41
COL4A2P08572 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.64■□□□□ 0.41
COL4A2P08572 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A2P08572 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.64■□□□□ 0.41
COL4A2P08572 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A2P08572 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.63■□□□□ 0.41
COL4A2P08572 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.63■□□□□ 0.41
COL4A2P08572 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COL4A2P08572 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A2P08572 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.63■□□□□ 0.41
COL4A2P08572 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A2P08572 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A2P08572 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.63■□□□□ 0.41
COL4A2P08572 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.63■□□□□ 0.41
COL4A2P08572 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A2P08572 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A2P08572 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.63■□□□□ 0.41
COL4A2P08572 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A2P08572 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A2P08572 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A2P08572 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
COL4A2P08572 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.63■□□□□ 0.41
COL4A2P08572 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.63■□□□□ 0.41
COL4A2P08572 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
COL4A2P08572 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COL4A2P08572 AC015911.4-201ENST00000588022 1070 ntBASIC17.63■□□□□ 0.41
COL4A2P08572 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COL4A2P08572 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.63■□□□□ 0.41
COL4A2P08572 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.63■□□□□ 0.41
COL4A2P08572 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COL4A2P08572 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.63■□□□□ 0.41
COL4A2P08572 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.62■□□□□ 0.41
COL4A2P08572 AL121761.2-201ENST00000598007 1648 ntBASIC17.62■□□□□ 0.41
COL4A2P08572 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A2P08572 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
COL4A2P08572 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A2P08572 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.62■□□□□ 0.41
COL4A2P08572 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A2P08572 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.62■□□□□ 0.41
COL4A2P08572 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A2P08572 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
COL4A2P08572 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms