Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.72□□□□□ -0.05
CTSDP07339 AC142381.4-202ENST00000563973 229 ntBASIC14.72□□□□□ -0.05
CTSDP07339 CD177P1-201ENST00000606252 935 ntBASIC14.72□□□□□ -0.05
CTSDP07339 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CTSDP07339 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CTSDP07339 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTSDP07339 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.72□□□□□ -0.05
CTSDP07339 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTSDP07339 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTSDP07339 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.72□□□□□ -0.05
CTSDP07339 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTSDP07339 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
CTSDP07339 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.72□□□□□ -0.05
CTSDP07339 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CTSDP07339 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTSDP07339 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CTSDP07339 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CTSDP07339 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.72□□□□□ -0.05
CTSDP07339 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CTSDP07339 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTSDP07339 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTSDP07339 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTSDP07339 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CTSDP07339 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CTSDP07339 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTSDP07339 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTSDP07339 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.71□□□□□ -0.05
CTSDP07339 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CTSDP07339 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CTSDP07339 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CTSDP07339 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.71□□□□□ -0.05
CTSDP07339 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CTSDP07339 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.71□□□□□ -0.05
CTSDP07339 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CTSDP07339 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CTSDP07339 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CTSDP07339 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.71□□□□□ -0.05
CTSDP07339 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CTSDP07339 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.71□□□□□ -0.05
CTSDP07339 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CTSDP07339 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CTSDP07339 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CTSDP07339 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CTSDP07339 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.71□□□□□ -0.05
CTSDP07339 NUDT16P1-203ENST00000513809 620 ntBASIC14.71□□□□□ -0.05
CTSDP07339 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.71□□□□□ -0.05
CTSDP07339 AL359736.2-201ENST00000621992 437 ntBASIC14.71□□□□□ -0.05
CTSDP07339 TMEM191A-211ENST00000637163 1067 ntBASIC14.71□□□□□ -0.05
CTSDP07339 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CTSDP07339 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CTSDP07339 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CTSDP07339 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CTSDP07339 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CTSDP07339 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CTSDP07339 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CTSDP07339 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CTSDP07339 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CTSDP07339 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CTSDP07339 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CTSDP07339 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.7□□□□□ -0.06
CTSDP07339 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.7□□□□□ -0.06
CTSDP07339 AL135905.2-201ENST00000584934 1404 ntBASIC14.7□□□□□ -0.06
CTSDP07339 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.7□□□□□ -0.06
CTSDP07339 AL158047.1-201ENST00000445918 881 ntBASIC14.7□□□□□ -0.06
CTSDP07339 TSPY17P-201ENST00000450329 467 ntBASIC14.7□□□□□ -0.06
CTSDP07339 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.7□□□□□ -0.06
CTSDP07339 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.7□□□□□ -0.06
CTSDP07339 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.7□□□□□ -0.06
CTSDP07339 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.7□□□□□ -0.06
CTSDP07339 AL353719.1-201ENST00000566847 864 ntBASIC14.7□□□□□ -0.06
CTSDP07339 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CTSDP07339 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.7□□□□□ -0.06
CTSDP07339 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.7□□□□□ -0.06
CTSDP07339 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.7□□□□□ -0.06
CTSDP07339 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.7□□□□□ -0.06
CTSDP07339 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.7□□□□□ -0.06
CTSDP07339 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CTSDP07339 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.7□□□□□ -0.06
CTSDP07339 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms