Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HMGN1P05114 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGN1P05114 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HMGN1P05114 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.06■□□□□ 0.16
HMGN1P05114 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGN1P05114 MIR1238-201ENST00000408483 83 ntBASIC16.06■□□□□ 0.16
HMGN1P05114 AL390955.1-201ENST00000428694 934 ntBASIC16.06■□□□□ 0.16
HMGN1P05114 KRT18P65-201ENST00000439811 1286 ntBASIC16.06■□□□□ 0.16
HMGN1P05114 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.06■□□□□ 0.16
HMGN1P05114 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.06■□□□□ 0.16
HMGN1P05114 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGN1P05114 NEK4P2-201ENST00000580004 1012 ntBASIC16.06■□□□□ 0.16
HMGN1P05114 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HMGN1P05114 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGN1P05114 AC011676.5-201ENST00000624864 2660 ntBASIC16.06■□□□□ 0.16
HMGN1P05114 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGN1P05114 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGN1P05114 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HMGN1P05114 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HMGN1P05114 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HMGN1P05114 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HMGN1P05114 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
HMGN1P05114 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGN1P05114 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
HMGN1P05114 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HMGN1P05114 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.05■□□□□ 0.16
HMGN1P05114 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HMGN1P05114 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.05■□□□□ 0.16
HMGN1P05114 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
HMGN1P05114 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HMGN1P05114 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGN1P05114 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HMGN1P05114 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
HMGN1P05114 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
HMGN1P05114 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGN1P05114 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.05■□□□□ 0.16
HMGN1P05114 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
HMGN1P05114 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.05■□□□□ 0.16
HMGN1P05114 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HMGN1P05114 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
HMGN1P05114 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.05■□□□□ 0.16
HMGN1P05114 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HMGN1P05114 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.05■□□□□ 0.16
HMGN1P05114 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.05■□□□□ 0.16
HMGN1P05114 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGN1P05114 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
HMGN1P05114 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGN1P05114 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGN1P05114 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HMGN1P05114 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
HMGN1P05114 MIR718-201ENST00000390190 70 ntBASIC16.04■□□□□ 0.16
HMGN1P05114 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGN1P05114 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.04■□□□□ 0.16
HMGN1P05114 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGN1P05114 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGN1P05114 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGN1P05114 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms