Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD74P04233 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.9□□□□□ -0.02
CD74P04233 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CD74P04233 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.9□□□□□ -0.02
CD74P04233 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CD74P04233 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CD74P04233 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CD74P04233 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
CD74P04233 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CD74P04233 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CD74P04233 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
CD74P04233 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.89□□□□□ -0.03
CD74P04233 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.89□□□□□ -0.03
CD74P04233 AC005104.2-201ENST00000427818 678 ntBASIC14.89□□□□□ -0.03
CD74P04233 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.89□□□□□ -0.03
CD74P04233 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.89□□□□□ -0.03
CD74P04233 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.89□□□□□ -0.03
CD74P04233 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.89□□□□□ -0.03
CD74P04233 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.89□□□□□ -0.03
CD74P04233 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CD74P04233 AC010240.3-201ENST00000607688 395 ntBASIC14.89□□□□□ -0.03
CD74P04233 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.89□□□□□ -0.03
CD74P04233 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.89□□□□□ -0.03
CD74P04233 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.89□□□□□ -0.03
CD74P04233 LINC01311-201ENST00000565162 1445 ntBASIC14.89□□□□□ -0.03
CD74P04233 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.89□□□□□ -0.03
CD74P04233 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 AC046185.3-201ENST00000623228 1824 ntBASIC14.89□□□□□ -0.03
CD74P04233 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 LINC02012-201ENST00000608206 1725 ntBASIC14.89□□□□□ -0.03
CD74P04233 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.89□□□□□ -0.03
CD74P04233 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.89□□□□□ -0.03
CD74P04233 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.89□□□□□ -0.03
CD74P04233 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CD74P04233 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD74P04233 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CD74P04233 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CD74P04233 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CD74P04233 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.88□□□□□ -0.03
CD74P04233 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.88□□□□□ -0.03
CD74P04233 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.88□□□□□ -0.03
CD74P04233 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.88□□□□□ -0.03
CD74P04233 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.88□□□□□ -0.03
CD74P04233 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.88□□□□□ -0.03
CD74P04233 AC104771.1-201ENST00000603335 964 ntBASIC14.88□□□□□ -0.03
CD74P04233 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.88□□□□□ -0.03
CD74P04233 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CD74P04233 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.88□□□□□ -0.03
CD74P04233 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CD74P04233 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.88□□□□□ -0.03
CD74P04233 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD74P04233 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms