Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC006538.3-201ENST00000612495 578 ntBASIC19.35■□□□□ 0.69
VTNP04004 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.35■□□□□ 0.69
VTNP04004 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
VTNP04004 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VTNP04004 AC138028.4-201ENST00000564984 1845 ntBASIC19.35■□□□□ 0.69
VTNP04004 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTNP04004 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VTNP04004 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
VTNP04004 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTNP04004 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTNP04004 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTNP04004 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.34■□□□□ 0.69
VTNP04004 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.34■□□□□ 0.69
VTNP04004 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTNP04004 AC073621.1-201ENST00000392730 636 ntBASIC19.34■□□□□ 0.69
VTNP04004 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.34■□□□□ 0.69
VTNP04004 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.34■□□□□ 0.69
VTNP04004 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.34■□□□□ 0.69
VTNP04004 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTNP04004 AC006557.2-201ENST00000592985 1240 ntBASIC19.34■□□□□ 0.69
VTNP04004 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
VTNP04004 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
VTNP04004 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTNP04004 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTNP04004 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTNP04004 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTNP04004 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.34■□□□□ 0.69
VTNP04004 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VTNP04004 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.34■□□□□ 0.69
VTNP04004 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.34■□□□□ 0.69
VTNP04004 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VTNP04004 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VTNP04004 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VTNP04004 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VTNP04004 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.33■□□□□ 0.69
VTNP04004 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
VTNP04004 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VTNP04004 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.33■□□□□ 0.69
VTNP04004 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.33■□□□□ 0.69
VTNP04004 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
VTNP04004 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.33■□□□□ 0.69
VTNP04004 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
VTNP04004 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
VTNP04004 AC003669.1-201ENST00000334569 611 ntBASIC19.33■□□□□ 0.68
VTNP04004 MED15P5-201ENST00000423150 992 ntBASIC19.33■□□□□ 0.68
VTNP04004 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
VTNP04004 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.33■□□□□ 0.68
VTNP04004 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
VTNP04004 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.33■□□□□ 0.68
VTNP04004 STK25P1-201ENST00000585406 838 ntBASIC19.33■□□□□ 0.68
VTNP04004 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.33■□□□□ 0.68
VTNP04004 AC027601.4-201ENST00000611259 610 ntBASIC19.33■□□□□ 0.68
VTNP04004 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
VTNP04004 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VTNP04004 MIR1199-201ENST00000621445 119 ntBASIC19.33■□□□□ 0.68
VTNP04004 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.33■□□□□ 0.68
VTNP04004 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VTNP04004 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VTNP04004 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.33■□□□□ 0.68
VTNP04004 ABALON-201ENST00000629058 1903 ntBASIC19.33■□□□□ 0.68
VTNP04004 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.33■□□□□ 0.68
VTNP04004 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
VTNP04004 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VTNP04004 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.33■□□□□ 0.68
VTNP04004 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VTNP04004 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VTNP04004 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.32■□□□□ 0.68
VTNP04004 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.32■□□□□ 0.68
VTNP04004 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VTNP04004 BICD1-207ENST00000551848 1962 ntBASIC19.32■□□□□ 0.68
VTNP04004 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
VTNP04004 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VTNP04004 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VTNP04004 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VTNP04004 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.32■□□□□ 0.68
VTNP04004 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.32■□□□□ 0.68
VTNP04004 STK19B-204ENST00000512515 211 ntBASIC19.32■□□□□ 0.68
VTNP04004 IGHV3-52-201ENST00000519770 353 ntBASIC19.32■□□□□ 0.68
VTNP04004 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VTNP04004 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.32■□□□□ 0.68
VTNP04004 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VTNP04004 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.32■□□□□ 0.68
VTNP04004 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
VTNP04004 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.32■□□□□ 0.68
VTNP04004 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
VTNP04004 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.32■□□□□ 0.68
VTNP04004 AL589182.2-201ENST00000619332 1049 ntBASIC19.32■□□□□ 0.68
VTNP04004 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
VTNP04004 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VTNP04004 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.32■□□□□ 0.68
VTNP04004 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VTNP04004 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
VTNP04004 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VTNP04004 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VTNP04004 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VTNP04004 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.32■□□□□ 0.68
VTNP04004 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VTNP04004 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.31■□□□□ 0.68
VTNP04004 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
VTNP04004 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms