Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EDF1O60869 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EDF1O60869 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.44■□□□□ 0.38
EDF1O60869 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EDF1O60869 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EDF1O60869 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EDF1O60869 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EDF1O60869 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.44■□□□□ 0.38
EDF1O60869 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.44■□□□□ 0.38
EDF1O60869 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EDF1O60869 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EDF1O60869 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
EDF1O60869 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
EDF1O60869 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.43■□□□□ 0.38
EDF1O60869 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
EDF1O60869 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.43■□□□□ 0.38
EDF1O60869 RNA5SP413-201ENST00000516373 109 ntBASIC17.43■□□□□ 0.38
EDF1O60869 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.43■□□□□ 0.38
EDF1O60869 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.43■□□□□ 0.38
EDF1O60869 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.43■□□□□ 0.38
EDF1O60869 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.43■□□□□ 0.38
EDF1O60869 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.43■□□□□ 0.38
EDF1O60869 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.43■□□□□ 0.38
EDF1O60869 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
EDF1O60869 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.43■□□□□ 0.38
EDF1O60869 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.43■□□□□ 0.38
EDF1O60869 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EDF1O60869 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.43■□□□□ 0.38
EDF1O60869 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.43■□□□□ 0.38
EDF1O60869 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.43■□□□□ 0.38
EDF1O60869 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
EDF1O60869 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
EDF1O60869 RNF216P1-203ENST00000404404 2427 ntBASIC17.42■□□□□ 0.38
EDF1O60869 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.42■□□□□ 0.38
EDF1O60869 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.42■□□□□ 0.38
EDF1O60869 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.42■□□□□ 0.38
EDF1O60869 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
EDF1O60869 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
EDF1O60869 LINC02012-201ENST00000608206 1725 ntBASIC17.42■□□□□ 0.38
EDF1O60869 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.42■□□□□ 0.38
EDF1O60869 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EDF1O60869 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.42■□□□□ 0.38
EDF1O60869 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.42■□□□□ 0.38
EDF1O60869 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.42■□□□□ 0.38
EDF1O60869 AC104771.1-201ENST00000603335 964 ntBASIC17.42■□□□□ 0.38
EDF1O60869 AC010240.3-201ENST00000607688 395 ntBASIC17.42■□□□□ 0.38
EDF1O60869 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.42■□□□□ 0.38
EDF1O60869 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EDF1O60869 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EDF1O60869 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
EDF1O60869 AC078925.2-201ENST00000624013 1973 ntBASIC17.42■□□□□ 0.38
EDF1O60869 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.42■□□□□ 0.38
EDF1O60869 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EDF1O60869 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EDF1O60869 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.41■□□□□ 0.38
EDF1O60869 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EDF1O60869 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
EDF1O60869 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EDF1O60869 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.41■□□□□ 0.38
EDF1O60869 LINC01311-201ENST00000565162 1445 ntBASIC17.41■□□□□ 0.38
EDF1O60869 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EDF1O60869 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EDF1O60869 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
EDF1O60869 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EDF1O60869 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EDF1O60869 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms