Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC004790.2-201ENST00000623588 572 ntBASIC20.6■□□□□ 0.89
CTNND1O60716 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNND1O60716 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNND1O60716 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CTNND1O60716 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNND1O60716 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.6■□□□□ 0.89
CTNND1O60716 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNND1O60716 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNND1O60716 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNND1O60716 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNND1O60716 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.6■□□□□ 0.89
CTNND1O60716 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNND1O60716 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CTNND1O60716 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CTNND1O60716 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.59■□□□□ 0.89
CTNND1O60716 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CTNND1O60716 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.59■□□□□ 0.89
CTNND1O60716 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.59■□□□□ 0.89
CTNND1O60716 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.59■□□□□ 0.89
CTNND1O60716 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.59■□□□□ 0.89
CTNND1O60716 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.59■□□□□ 0.89
CTNND1O60716 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.59■□□□□ 0.89
CTNND1O60716 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 HMGN1P19-201ENST00000436976 333 ntBASIC20.59■□□□□ 0.89
CTNND1O60716 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 STK19B-204ENST00000512515 211 ntBASIC20.59■□□□□ 0.89
CTNND1O60716 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.59■□□□□ 0.89
CTNND1O60716 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 AL805961.1-202ENST00000641562 540 ntBASIC20.59■□□□□ 0.89
CTNND1O60716 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.59■□□□□ 0.89
CTNND1O60716 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CTNND1O60716 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CTNND1O60716 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTNND1O60716 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTNND1O60716 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTNND1O60716 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.58■□□□□ 0.89
CTNND1O60716 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTNND1O60716 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
CTNND1O60716 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTNND1O60716 AC100803.2-201ENST00000562459 1963 ntBASIC20.58■□□□□ 0.89
CTNND1O60716 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTNND1O60716 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.58■□□□□ 0.89
CTNND1O60716 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.58■□□□□ 0.89
CTNND1O60716 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CTNND1O60716 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.58■□□□□ 0.89
CTNND1O60716 IGHV3-52-201ENST00000519770 353 ntBASIC20.58■□□□□ 0.89
CTNND1O60716 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.58■□□□□ 0.89
CTNND1O60716 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.58■□□□□ 0.89
CTNND1O60716 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.58■□□□□ 0.89
CTNND1O60716 AC018845.2-201ENST00000568326 409 ntBASIC20.58■□□□□ 0.89
CTNND1O60716 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.58■□□□□ 0.89
CTNND1O60716 C20orf181-201ENST00000623918 480 ntBASIC20.58■□□□□ 0.89
CTNND1O60716 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTNND1O60716 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.58■□□□□ 0.88
CTNND1O60716 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTNND1O60716 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.58■□□□□ 0.88
CTNND1O60716 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTNND1O60716 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CTNND1O60716 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.58■□□□□ 0.88
CTNND1O60716 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.58■□□□□ 0.88
CTNND1O60716 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTNND1O60716 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTNND1O60716 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.58■□□□□ 0.88
CTNND1O60716 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.58■□□□□ 0.88
CTNND1O60716 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTNND1O60716 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CTNND1O60716 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.58■□□□□ 0.88
CTNND1O60716 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.58■□□□□ 0.88
CTNND1O60716 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CTNND1O60716 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CTNND1O60716 AC009949.1-201ENST00000623048 1830 ntBASIC20.57■□□□□ 0.88
CTNND1O60716 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNND1O60716 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CTNND1O60716 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTNND1O60716 GPR89P-201ENST00000407924 1495 ntBASIC20.57■□□□□ 0.88
CTNND1O60716 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.57■□□□□ 0.88
CTNND1O60716 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.57■□□□□ 0.88
CTNND1O60716 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.57■□□□□ 0.88
CTNND1O60716 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CTNND1O60716 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.57■□□□□ 0.88
CTNND1O60716 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.57■□□□□ 0.88
CTNND1O60716 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNND1O60716 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
CTNND1O60716 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.57■□□□□ 0.88
CTNND1O60716 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms