Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZIC3O60481 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.91■□□□□ 0.14
ZIC3O60481 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZIC3O60481 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZIC3O60481 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.91■□□□□ 0.14
ZIC3O60481 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZIC3O60481 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZIC3O60481 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
ZIC3O60481 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.91■□□□□ 0.14
ZIC3O60481 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.91■□□□□ 0.14
ZIC3O60481 AC002558.1-201ENST00000488906 803 ntBASIC15.91■□□□□ 0.14
ZIC3O60481 AP002469.2-201ENST00000531724 424 ntBASIC15.91■□□□□ 0.14
ZIC3O60481 TP73-AS1-207ENST00000624167 988 ntBASIC15.91■□□□□ 0.14
ZIC3O60481 AC073592.5-201ENST00000624854 528 ntBASIC15.91■□□□□ 0.14
ZIC3O60481 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZIC3O60481 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
ZIC3O60481 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.91■□□□□ 0.14
ZIC3O60481 AC132938.5-201ENST00000624980 1813 ntBASIC15.91■□□□□ 0.14
ZIC3O60481 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZIC3O60481 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZIC3O60481 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZIC3O60481 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZIC3O60481 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.91■□□□□ 0.14
ZIC3O60481 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
ZIC3O60481 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZIC3O60481 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.9■□□□□ 0.14
ZIC3O60481 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ZIC3O60481 AL356309.3-201ENST00000624132 1934 ntBASIC15.9■□□□□ 0.14
ZIC3O60481 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.9■□□□□ 0.14
ZIC3O60481 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.9■□□□□ 0.14
ZIC3O60481 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.9■□□□□ 0.14
ZIC3O60481 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.9■□□□□ 0.14
ZIC3O60481 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
ZIC3O60481 AC009078.2-202ENST00000463353 338 ntBASIC15.9■□□□□ 0.14
ZIC3O60481 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.9■□□□□ 0.14
ZIC3O60481 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.9■□□□□ 0.14
ZIC3O60481 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.9■□□□□ 0.14
ZIC3O60481 NKAPP1-205ENST00000585790 367 ntBASIC15.9■□□□□ 0.14
ZIC3O60481 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.9■□□□□ 0.14
ZIC3O60481 LINC01451-201ENST00000623792 534 ntBASIC15.9■□□□□ 0.14
ZIC3O60481 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ZIC3O60481 AC018470.1-201ENST00000624790 3129 ntBASIC15.9■□□□□ 0.14
ZIC3O60481 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ZIC3O60481 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ZIC3O60481 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.9■□□□□ 0.14
ZIC3O60481 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
ZIC3O60481 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.9■□□□□ 0.14
ZIC3O60481 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.9■□□□□ 0.14
ZIC3O60481 AC079776.2-201ENST00000641154 1609 ntBASIC15.9■□□□□ 0.14
ZIC3O60481 NOC2LP2-201ENST00000407594 1944 ntBASIC15.9■□□□□ 0.14
ZIC3O60481 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZIC3O60481 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
ZIC3O60481 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ZIC3O60481 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ZIC3O60481 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ZIC3O60481 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ZIC3O60481 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZIC3O60481 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZIC3O60481 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZIC3O60481 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.89■□□□□ 0.13
ZIC3O60481 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZIC3O60481 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.89■□□□□ 0.13
ZIC3O60481 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZIC3O60481 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.89■□□□□ 0.13
ZIC3O60481 FDX1P1-201ENST00000449115 551 ntBASIC15.89■□□□□ 0.13
ZIC3O60481 FAM197Y8-203ENST00000450145 560 ntBASIC15.89■□□□□ 0.13
ZIC3O60481 IGHV3-52-201ENST00000519770 353 ntBASIC15.89■□□□□ 0.13
ZIC3O60481 SART3-203ENST00000546611 1184 ntBASIC15.89■□□□□ 0.13
ZIC3O60481 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
ZIC3O60481 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.89■□□□□ 0.13
ZIC3O60481 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.89■□□□□ 0.13
ZIC3O60481 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.89■□□□□ 0.13
ZIC3O60481 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZIC3O60481 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZIC3O60481 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ZIC3O60481 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZIC3O60481 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms