Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.72■□□□□ 0.27
URB1O60287 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.72■□□□□ 0.27
URB1O60287 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
URB1O60287 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.72■□□□□ 0.27
URB1O60287 AP000867.4-201ENST00000641616 219 ntBASIC16.72■□□□□ 0.27
URB1O60287 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
URB1O60287 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
URB1O60287 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
URB1O60287 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
URB1O60287 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
URB1O60287 AC006504.4-201ENST00000592118 1568 ntBASIC16.71■□□□□ 0.27
URB1O60287 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
URB1O60287 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
URB1O60287 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.71■□□□□ 0.27
URB1O60287 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
URB1O60287 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
URB1O60287 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
URB1O60287 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.71■□□□□ 0.27
URB1O60287 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
URB1O60287 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.71■□□□□ 0.27
URB1O60287 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.71■□□□□ 0.27
URB1O60287 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.71■□□□□ 0.27
URB1O60287 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
URB1O60287 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.71■□□□□ 0.27
URB1O60287 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.71■□□□□ 0.27
URB1O60287 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
URB1O60287 OR6D1P-203ENST00000641209 4860 ntBASIC16.71■□□□□ 0.27
URB1O60287 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
URB1O60287 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
URB1O60287 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
URB1O60287 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.71■□□□□ 0.27
URB1O60287 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.71■□□□□ 0.27
URB1O60287 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.71■□□□□ 0.27
URB1O60287 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.71■□□□□ 0.27
URB1O60287 DUX4L17-201ENST00000557360 1267 ntBASIC16.71■□□□□ 0.27
URB1O60287 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
URB1O60287 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.71■□□□□ 0.27
URB1O60287 AL513210.1-201ENST00000629608 234 ntBASIC16.71■□□□□ 0.27
URB1O60287 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
URB1O60287 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
URB1O60287 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
URB1O60287 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
URB1O60287 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
URB1O60287 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
URB1O60287 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
URB1O60287 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
URB1O60287 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.7■□□□□ 0.26
URB1O60287 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.7■□□□□ 0.26
URB1O60287 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.7■□□□□ 0.26
URB1O60287 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.7■□□□□ 0.26
URB1O60287 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.7■□□□□ 0.26
URB1O60287 AC068587.9-201ENST00000641814 219 ntBASIC16.7■□□□□ 0.26
URB1O60287 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
URB1O60287 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.7■□□□□ 0.26
URB1O60287 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
URB1O60287 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.7■□□□□ 0.26
URB1O60287 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.7■□□□□ 0.26
URB1O60287 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
URB1O60287 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
URB1O60287 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.7■□□□□ 0.26
URB1O60287 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
URB1O60287 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
URB1O60287 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.7■□□□□ 0.26
URB1O60287 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
URB1O60287 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
URB1O60287 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.7■□□□□ 0.26
URB1O60287 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.7■□□□□ 0.26
URB1O60287 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
URB1O60287 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.69■□□□□ 0.26
URB1O60287 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
URB1O60287 AC073130.3-201ENST00000624389 2278 ntBASIC16.69■□□□□ 0.26
URB1O60287 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
URB1O60287 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
URB1O60287 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
URB1O60287 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
URB1O60287 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
URB1O60287 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
URB1O60287 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
URB1O60287 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
URB1O60287 PDPK2P-202ENST00000562415 1191 ntBASIC16.69■□□□□ 0.26
URB1O60287 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.69■□□□□ 0.26
URB1O60287 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
URB1O60287 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
URB1O60287 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
URB1O60287 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
URB1O60287 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.69■□□□□ 0.26
URB1O60287 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
URB1O60287 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
URB1O60287 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.69■□□□□ 0.26
URB1O60287 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
URB1O60287 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 AC004461.1-201ENST00000412461 403 ntBASIC16.68■□□□□ 0.26
URB1O60287 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.68■□□□□ 0.26
URB1O60287 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.68■□□□□ 0.26
URB1O60287 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
URB1O60287 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.68■□□□□ 0.26
URB1O60287 AC109322.1-201ENST00000524499 1264 ntBASIC16.68■□□□□ 0.26
URB1O60287 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.68■□□□□ 0.26
URB1O60287 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms