Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NDUFA1O15239 SDHAP2-201ENST00000455183 2001 ntBASIC12.15□□□□□ -0.47
NDUFA1O15239 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NDUFA1O15239 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NDUFA1O15239 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC12.15□□□□□ -0.47
NDUFA1O15239 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
NDUFA1O15239 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 AC106886.4-201ENST00000623557 2502 ntBASIC12.14□□□□□ -0.47
NDUFA1O15239 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.14□□□□□ -0.47
NDUFA1O15239 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NDUFA1O15239 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.14□□□□□ -0.47
NDUFA1O15239 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
NDUFA1O15239 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 GPAT2P1-201ENST00000444924 1672 ntBASIC12.14□□□□□ -0.47
NDUFA1O15239 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.14□□□□□ -0.47
NDUFA1O15239 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
NDUFA1O15239 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.14□□□□□ -0.47
NDUFA1O15239 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NDUFA1O15239 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.14□□□□□ -0.47
NDUFA1O15239 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC12.14□□□□□ -0.47
NDUFA1O15239 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.14□□□□□ -0.47
NDUFA1O15239 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 AC008622.2-201ENST00000617006 1229 ntBASIC12.14□□□□□ -0.47
NDUFA1O15239 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.14□□□□□ -0.47
NDUFA1O15239 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NDUFA1O15239 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.14□□□□□ -0.47
NDUFA1O15239 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.14□□□□□ -0.47
NDUFA1O15239 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.14□□□□□ -0.47
NDUFA1O15239 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NDUFA1O15239 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.14□□□□□ -0.47
NDUFA1O15239 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.14□□□□□ -0.47
NDUFA1O15239 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NDUFA1O15239 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
NDUFA1O15239 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NDUFA1O15239 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.13□□□□□ -0.47
NDUFA1O15239 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.13□□□□□ -0.47
NDUFA1O15239 DOC2GP-204ENST00000639052 2548 ntBASIC12.13□□□□□ -0.47
NDUFA1O15239 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
NDUFA1O15239 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
NDUFA1O15239 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
NDUFA1O15239 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12.13□□□□□ -0.47
NDUFA1O15239 HLA-J-201ENST00000462773 1622 ntBASIC12.13□□□□□ -0.47
NDUFA1O15239 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.13□□□□□ -0.47
NDUFA1O15239 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NDUFA1O15239 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
NDUFA1O15239 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 MESTP1-201ENST00000404287 994 ntBASIC12.13□□□□□ -0.47
NDUFA1O15239 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.13□□□□□ -0.47
NDUFA1O15239 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NDUFA1O15239 AL355355.2-201ENST00000442321 338 ntBASIC12.13□□□□□ -0.47
NDUFA1O15239 UBE2SP1-201ENST00000450587 669 ntBASIC12.13□□□□□ -0.47
NDUFA1O15239 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.13□□□□□ -0.47
NDUFA1O15239 AC116562.2-201ENST00000507042 360 ntBASIC12.13□□□□□ -0.47
NDUFA1O15239 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.13□□□□□ -0.47
NDUFA1O15239 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.13□□□□□ -0.47
NDUFA1O15239 AC142381.4-202ENST00000563973 229 ntBASIC12.13□□□□□ -0.47
NDUFA1O15239 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
NDUFA1O15239 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.13□□□□□ -0.47
NDUFA1O15239 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.13□□□□□ -0.47
NDUFA1O15239 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.13□□□□□ -0.47
NDUFA1O15239 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.13□□□□□ -0.47
NDUFA1O15239 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NDUFA1O15239 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
NDUFA1O15239 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 PCDHA14-201ENST00000506751 2298 ntBASIC12.13□□□□□ -0.47
NDUFA1O15239 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms