Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC28.32■■■□□ 2.12
CHD1O14646 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC28.32■■■□□ 2.12
CHD1O14646 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
CHD1O14646 LINC01225-203ENST00000563550 1244 ntBASIC28.32■■■□□ 2.12
CHD1O14646 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC28.32■■■□□ 2.12
CHD1O14646 AC084346.2-201ENST00000607097 949 ntBASIC28.32■■■□□ 2.12
CHD1O14646 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
CHD1O14646 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC28.31■■■□□ 2.12
CHD1O14646 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC28.31■■■□□ 2.12
CHD1O14646 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC28.31■■■□□ 2.12
CHD1O14646 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CHD1O14646 AL645728.2-201ENST00000641974 660 ntBASIC28.31■■■□□ 2.12
CHD1O14646 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC28.31■■■□□ 2.12
CHD1O14646 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC28.31■■■□□ 2.12
CHD1O14646 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
CHD1O14646 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
CHD1O14646 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC28.3■■■□□ 2.12
CHD1O14646 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD1O14646 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD1O14646 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC28.3■■■□□ 2.12
CHD1O14646 AL157384.1-201ENST00000445995 2473 ntBASIC28.3■■■□□ 2.12
CHD1O14646 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC28.3■■■□□ 2.12
CHD1O14646 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
CHD1O14646 NOP2-211ENST00000540228 668 ntTSL 2 BASIC28.3■■■□□ 2.12
CHD1O14646 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD1O14646 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
CHD1O14646 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD1O14646 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD1O14646 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CHD1O14646 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD1O14646 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD1O14646 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD1O14646 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD1O14646 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
CHD1O14646 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC28.29■■■□□ 2.12
CHD1O14646 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CHD1O14646 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHD1O14646 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CHD1O14646 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHD1O14646 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC28.29■■■□□ 2.12
CHD1O14646 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC28.29■■■□□ 2.12
CHD1O14646 AL033527.4-201ENST00000641026 673 ntBASIC28.29■■■□□ 2.12
CHD1O14646 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHD1O14646 HARS-201ENST00000307633 1780 ntTSL 2 BASIC28.29■■■□□ 2.12
CHD1O14646 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHD1O14646 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC28.29■■■□□ 2.12
CHD1O14646 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CHD1O14646 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
CHD1O14646 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CHD1O14646 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHD1O14646 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHD1O14646 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHD1O14646 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CHD1O14646 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
CHD1O14646 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC28.29■■■□□ 2.12
CHD1O14646 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
CHD1O14646 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHD1O14646 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CHD1O14646 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC28.29■■■□□ 2.12
CHD1O14646 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC28.29■■■□□ 2.12
CHD1O14646 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC28.29■■■□□ 2.12
CHD1O14646 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CHD1O14646 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC28.28■■■□□ 2.12
CHD1O14646 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC28.28■■■□□ 2.12
CHD1O14646 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CHD1O14646 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC28.28■■■□□ 2.12
CHD1O14646 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CHD1O14646 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC28.28■■■□□ 2.12
CHD1O14646 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC28.28■■■□□ 2.12
CHD1O14646 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC28.28■■■□□ 2.12
CHD1O14646 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
CHD1O14646 FLYWCH1P1-201ENST00000460917 1874 ntBASIC28.28■■■□□ 2.12
CHD1O14646 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC28.28■■■□□ 2.12
CHD1O14646 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC28.28■■■□□ 2.12
CHD1O14646 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC28.27■■■□□ 2.12
CHD1O14646 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CHD1O14646 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
CHD1O14646 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC28.27■■■□□ 2.12
CHD1O14646 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC28.27■■■□□ 2.12
CHD1O14646 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CHD1O14646 PTPA-220ENST00000436883 532 ntTSL 4 BASIC28.27■■■□□ 2.12
CHD1O14646 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC28.27■■■□□ 2.12
CHD1O14646 KRT8P23-201ENST00000560090 1207 ntBASIC28.27■■■□□ 2.12
CHD1O14646 ANO7L1-203ENST00000602586 1720 ntBASIC28.27■■■□□ 2.12
CHD1O14646 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC28.27■■■□□ 2.12
CHD1O14646 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC28.27■■■□□ 2.12
CHD1O14646 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC28.27■■■□□ 2.12
CHD1O14646 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CHD1O14646 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.12
CHD1O14646 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC28.26■■■□□ 2.12
CHD1O14646 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.12
CHD1O14646 SATB1-217ENST00000493952 626 ntTSL 3 BASIC28.26■■■□□ 2.12
CHD1O14646 AC119751.2-201ENST00000504529 210 ntBASIC28.26■■■□□ 2.12
CHD1O14646 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC28.26■■■□□ 2.12
CHD1O14646 AL009183.1-201ENST00000603760 355 ntBASIC28.26■■■□□ 2.12
CHD1O14646 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC28.26■■■□□ 2.12
CHD1O14646 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHD1O14646 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CHD1O14646 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHD1O14646 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms