Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.72■□□□□ 0.27
CLIC1O00299 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.72■□□□□ 0.27
CLIC1O00299 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.72■□□□□ 0.27
CLIC1O00299 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.72■□□□□ 0.27
CLIC1O00299 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.72■□□□□ 0.27
CLIC1O00299 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.72■□□□□ 0.27
CLIC1O00299 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.72■□□□□ 0.27
CLIC1O00299 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLIC1O00299 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CLIC1O00299 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.72■□□□□ 0.27
CLIC1O00299 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLIC1O00299 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLIC1O00299 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.72■□□□□ 0.27
CLIC1O00299 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CLIC1O00299 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLIC1O00299 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CLIC1O00299 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.71■□□□□ 0.27
CLIC1O00299 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.71■□□□□ 0.27
CLIC1O00299 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CLIC1O00299 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.71■□□□□ 0.27
CLIC1O00299 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.71■□□□□ 0.27
CLIC1O00299 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.71■□□□□ 0.27
CLIC1O00299 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.71■□□□□ 0.27
CLIC1O00299 AL138966.2-201ENST00000621997 464 ntBASIC16.71■□□□□ 0.27
CLIC1O00299 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.71■□□□□ 0.27
CLIC1O00299 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.71■□□□□ 0.27
CLIC1O00299 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLIC1O00299 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLIC1O00299 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.71■□□□□ 0.27
CLIC1O00299 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CLIC1O00299 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLIC1O00299 AL391807.1-203ENST00000604392 2365 ntBASIC16.71■□□□□ 0.26
CLIC1O00299 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLIC1O00299 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CLIC1O00299 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CLIC1O00299 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLIC1O00299 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CLIC1O00299 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
CLIC1O00299 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.7■□□□□ 0.26
CLIC1O00299 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 RASA4DP-201ENST00000460726 1199 ntBASIC16.7■□□□□ 0.26
CLIC1O00299 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.7■□□□□ 0.26
CLIC1O00299 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.7■□□□□ 0.26
CLIC1O00299 AC079602.3-201ENST00000623931 403 ntBASIC16.7■□□□□ 0.26
CLIC1O00299 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLIC1O00299 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLIC1O00299 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLIC1O00299 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLIC1O00299 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLIC1O00299 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLIC1O00299 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLIC1O00299 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLIC1O00299 OR6D1P-203ENST00000641209 4860 ntBASIC16.69■□□□□ 0.26
CLIC1O00299 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.69■□□□□ 0.26
CLIC1O00299 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLIC1O00299 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLIC1O00299 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLIC1O00299 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLIC1O00299 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.69■□□□□ 0.26
CLIC1O00299 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.69■□□□□ 0.26
CLIC1O00299 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms