Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX39AO00148 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DDX39AO00148 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
DDX39AO00148 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DDX39AO00148 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX39AO00148 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.92■□□□□ 0.78
DDX39AO00148 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 COX5BP2-201ENST00000392354 334 ntBASIC19.92■□□□□ 0.78
DDX39AO00148 RBM17P3-201ENST00000417687 1192 ntBASIC19.92■□□□□ 0.78
DDX39AO00148 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
DDX39AO00148 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.92■□□□□ 0.78
DDX39AO00148 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX39AO00148 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX39AO00148 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
DDX39AO00148 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DDX39AO00148 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX39AO00148 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX39AO00148 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
DDX39AO00148 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX39AO00148 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX39AO00148 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX39AO00148 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX39AO00148 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX39AO00148 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX39AO00148 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX39AO00148 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
DDX39AO00148 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX39AO00148 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.91■□□□□ 0.78
DDX39AO00148 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX39AO00148 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.91■□□□□ 0.78
DDX39AO00148 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX39AO00148 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX39AO00148 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.91■□□□□ 0.78
DDX39AO00148 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX39AO00148 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX39AO00148 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
DDX39AO00148 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX39AO00148 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX39AO00148 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX39AO00148 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX39AO00148 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX39AO00148 KRT18P55-202ENST00000578578 1546 ntBASIC19.91■□□□□ 0.78
DDX39AO00148 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX39AO00148 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX39AO00148 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX39AO00148 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX39AO00148 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX39AO00148 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX39AO00148 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX39AO00148 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX39AO00148 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX39AO00148 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX39AO00148 AL390961.4-201ENST00000623958 2535 ntBASIC19.9■□□□□ 0.78
DDX39AO00148 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX39AO00148 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX39AO00148 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
DDX39AO00148 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX39AO00148 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.9■□□□□ 0.78
DDX39AO00148 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.9■□□□□ 0.78
DDX39AO00148 AC122714.2-201ENST00000502787 707 ntBASIC19.9■□□□□ 0.78
DDX39AO00148 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX39AO00148 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX39AO00148 SART3-203ENST00000546611 1184 ntBASIC19.9■□□□□ 0.78
DDX39AO00148 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX39AO00148 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.9■□□□□ 0.78
DDX39AO00148 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.9■□□□□ 0.78
DDX39AO00148 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.9■□□□□ 0.78
DDX39AO00148 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.9■□□□□ 0.78
DDX39AO00148 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX39AO00148 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX39AO00148 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX39AO00148 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX39AO00148 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX39AO00148 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX39AO00148 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX39AO00148 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX39AO00148 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
DDX39AO00148 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
DDX39AO00148 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.89■□□□□ 0.78
DDX39AO00148 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
DDX39AO00148 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
DDX39AO00148 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms