Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 AC004835.2-201ENST00000603762 682 ntBASIC17.26■□□□□ 0.35
C4orf47A7E2U8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 AC010460.3-201ENST00000511359 1579 ntBASIC17.26■□□□□ 0.35
C4orf47A7E2U8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.26■□□□□ 0.35
C4orf47A7E2U8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 IGLL3P-201ENST00000412472 434 ntBASIC17.25■□□□□ 0.35
C4orf47A7E2U8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
C4orf47A7E2U8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 AC096633.1-201ENST00000422446 749 ntBASIC17.24■□□□□ 0.35
C4orf47A7E2U8 AC103564.2-201ENST00000432853 1299 ntBASIC17.24■□□□□ 0.35
C4orf47A7E2U8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 AC190387.1-201ENST00000551683 408 ntBASIC17.24■□□□□ 0.35
C4orf47A7E2U8 KRT19P2-202ENST00000557173 1012 ntBASIC17.24■□□□□ 0.35
C4orf47A7E2U8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 AC025678.2-201ENST00000562061 970 ntBASIC17.24■□□□□ 0.35
C4orf47A7E2U8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
C4orf47A7E2U8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 CROCCP3-202ENST00000420820 1947 ntBASIC17.23■□□□□ 0.35
C4orf47A7E2U8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 NCF1C-201ENST00000438382 1427 ntBASIC17.23■□□□□ 0.35
C4orf47A7E2U8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C4orf47A7E2U8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms