Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 AC004951.3-201ENST00000418645 1148 ntBASIC18.37■□□□□ 0.53
SRRM3A6NNA2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM3A6NNA2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
SRRM3A6NNA2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.35■□□□□ 0.53
SRRM3A6NNA2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 AIRN-201ENST00000601203 4374 ntBASIC18.35■□□□□ 0.53
SRRM3A6NNA2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 AC079781.3-201ENST00000449110 356 ntBASIC18.35■□□□□ 0.53
SRRM3A6NNA2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM3A6NNA2 PHGDH-209ENST00000641074 1780 ntBASIC18.35■□□□□ 0.53
SRRM3A6NNA2 DOC2GP-204ENST00000639052 2548 ntBASIC18.34■□□□□ 0.53
SRRM3A6NNA2 LINC01126-201ENST00000623515 1646 ntBASIC18.34■□□□□ 0.53
SRRM3A6NNA2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 AGGF1P2-201ENST00000426656 2106 ntBASIC18.34■□□□□ 0.53
SRRM3A6NNA2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms