Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.83■□□□□ 0.6
RCCD1A6NED2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RCCD1A6NED2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RCCD1A6NED2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCCD1A6NED2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCCD1A6NED2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCCD1A6NED2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.82■□□□□ 0.6
RCCD1A6NED2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RCCD1A6NED2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCCD1A6NED2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCCD1A6NED2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCCD1A6NED2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCCD1A6NED2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
RCCD1A6NED2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RCCD1A6NED2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.82■□□□□ 0.6
RCCD1A6NED2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.82■□□□□ 0.6
RCCD1A6NED2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
RCCD1A6NED2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RCCD1A6NED2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.82■□□□□ 0.6
RCCD1A6NED2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCCD1A6NED2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RCCD1A6NED2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.82■□□□□ 0.6
RCCD1A6NED2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RCCD1A6NED2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCCD1A6NED2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCCD1A6NED2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.82■□□□□ 0.6
RCCD1A6NED2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RCCD1A6NED2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCCD1A6NED2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RCCD1A6NED2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RCCD1A6NED2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RCCD1A6NED2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.81■□□□□ 0.6
RCCD1A6NED2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RCCD1A6NED2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RCCD1A6NED2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RCCD1A6NED2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RCCD1A6NED2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RCCD1A6NED2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RCCD1A6NED2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.81■□□□□ 0.6
RCCD1A6NED2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RCCD1A6NED2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RCCD1A6NED2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RCCD1A6NED2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.81■□□□□ 0.6
RCCD1A6NED2 AC112698.1-201ENST00000510299 916 ntBASIC18.81■□□□□ 0.6
RCCD1A6NED2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.81■□□□□ 0.6
RCCD1A6NED2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.81■□□□□ 0.6
RCCD1A6NED2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RCCD1A6NED2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
RCCD1A6NED2 LINC01311-201ENST00000565162 1445 ntBASIC18.81■□□□□ 0.6
RCCD1A6NED2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RCCD1A6NED2 AL391807.1-203ENST00000604392 2365 ntBASIC18.81■□□□□ 0.6
RCCD1A6NED2 AC092053.1-201ENST00000605787 1936 ntBASIC18.8■□□□□ 0.6
RCCD1A6NED2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
RCCD1A6NED2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RCCD1A6NED2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 MMP23A-201ENST00000234610 1017 ntBASIC18.8■□□□□ 0.6
RCCD1A6NED2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.8■□□□□ 0.6
RCCD1A6NED2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.8■□□□□ 0.6
RCCD1A6NED2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RCCD1A6NED2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
RCCD1A6NED2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.8■□□□□ 0.6
RCCD1A6NED2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.8■□□□□ 0.6
RCCD1A6NED2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 AL512604.3-201ENST00000569583 964 ntBASIC18.8■□□□□ 0.6
RCCD1A6NED2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RCCD1A6NED2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RCCD1A6NED2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RCCD1A6NED2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RCCD1A6NED2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RCCD1A6NED2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.8■□□□□ 0.6
RCCD1A6NED2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RCCD1A6NED2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.8■□□□□ 0.6
RCCD1A6NED2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCCD1A6NED2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCCD1A6NED2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RCCD1A6NED2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCCD1A6NED2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms