Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 LTB4R2-202ENST00000528054 3092 ntBASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
PTPDC1A2A3K4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPDC1A2A3K4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.83■□□□□ 0.92
PTPDC1A2A3K4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.83■□□□□ 0.92
PTPDC1A2A3K4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPDC1A2A3K4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPDC1A2A3K4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPDC1A2A3K4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.83■□□□□ 0.92
PTPDC1A2A3K4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPDC1A2A3K4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 FAAHP1-202ENST00000446499 1238 ntBASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 AC139713.2-201ENST00000641328 2723 ntBASIC20.82■□□□□ 0.92
PTPDC1A2A3K4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 MINOS1P3-201ENST00000457048 203 ntBASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.81■□□□□ 0.92
PTPDC1A2A3K4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 LINC00304-203ENST00000565008 1864 ntBASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 NUS1P2-201ENST00000417358 873 ntBASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPDC1A2A3K4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms