Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 AC116407.2-201ENST00000613639 860 ntBASIC15.44■□□□□ 0.06
SHISA3A0PJX4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SHISA3A0PJX4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 C1QBPP2-201ENST00000528754 825 ntBASIC15.43■□□□□ 0.06
SHISA3A0PJX4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 AL023803.3-201ENST00000615559 522 ntBASIC15.43■□□□□ 0.06
SHISA3A0PJX4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 LINC02012-201ENST00000608206 1725 ntBASIC15.43■□□□□ 0.06
SHISA3A0PJX4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.43■□□□□ 0.06
SHISA3A0PJX4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 AC138932.1-201ENST00000534164 6830 ntBASIC15.42■□□□□ 0.06
SHISA3A0PJX4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 AC007950.2-201ENST00000615045 2347 ntBASIC15.42■□□□□ 0.06
SHISA3A0PJX4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms