Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.64■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AC097374.2-201ENST00000618617 1306 ntBASIC15.64■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.64■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.64■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AC125634.1-201ENST00000438758 1403 ntBASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 LYSMD4-203ENST00000378904 2122 ntBASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AC007967.3-201ENST00000434308 558 ntBASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 BX276092.5-203ENST00000456199 560 ntBASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 KRT18P35-201ENST00000510488 1269 ntBASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AL121672.3-201ENST00000608644 468 ntBASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AL023806.1-201ENST00000603994 1649 ntBASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 COX5BP2-201ENST00000392354 334 ntBASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 CHCHD2P8-201ENST00000429873 447 ntBASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AP002383.4-201ENST00000442518 975 ntBASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 AL138831.2-201ENST00000606564 490 ntBASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 IER3-202ENST00000376377 1350 ntBASIC15.62■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
IGKV1D-43A0A0B4J1Z2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms