Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA7Q9Y5G6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 AC006116.8-202ENST00000587620 1550 ntBASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 KRT18P41-201ENST00000518924 1277 ntBASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA7Q9Y5G6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PCDHGA7Q9Y5G6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDHGA7Q9Y5G6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDHGA7Q9Y5G6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA7Q9Y5G6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA7Q9Y5G6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 AC138894.3-201ENST00000603787 634 ntBASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA7Q9Y5G6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 AC124067.4-201ENST00000519691 2379 ntBASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 IGHV3-47-201ENST00000425060 335 ntBASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 KRT16P4-201ENST00000453883 522 ntBASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 GUSBP12-201ENST00000513727 720 ntBASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 AC099336.1-202ENST00000602961 463 ntBASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA7Q9Y5G6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms