Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB2Q9Y5E7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB2Q9Y5E7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PCDHB2Q9Y5E7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.39■□□□□ 0.7
PCDHB2Q9Y5E7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.39■□□□□ 0.7
PCDHB2Q9Y5E7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB2Q9Y5E7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 AC096633.1-201ENST00000422446 749 ntBASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 IL9RP2-201ENST00000423948 1312 ntBASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 AC068880.1-201ENST00000507289 2297 ntBASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 AP000997.3-201ENST00000623333 2250 ntBASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB2Q9Y5E7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 HNRNPDP1-201ENST00000439535 754 ntBASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 SART3-203ENST00000546611 1184 ntBASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 AC022898.2-201ENST00000616822 1312 ntBASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.38■□□□□ 0.69
PCDHB2Q9Y5E7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 AC093909.1-201ENST00000504731 1122 ntBASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 AC021087.4-201ENST00000563761 564 ntBASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 AL049840.3-201ENST00000602669 611 ntBASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB2Q9Y5E7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms