Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP15Q9Y4E8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
USP15Q9Y4E8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP15Q9Y4E8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.11■□□□□ 0.65
USP15Q9Y4E8 FEM1AP3-201ENST00000403722 1741 ntBASIC19.11■□□□□ 0.65
USP15Q9Y4E8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
USP15Q9Y4E8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP15Q9Y4E8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
USP15Q9Y4E8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP15Q9Y4E8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 AC021087.4-201ENST00000563761 564 ntBASIC19.1■□□□□ 0.65
USP15Q9Y4E8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.1■□□□□ 0.65
USP15Q9Y4E8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 AC112777.1-201ENST00000540175 1423 ntBASIC19.09■□□□□ 0.65
USP15Q9Y4E8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 RPS2P1-201ENST00000434010 821 ntBASIC19.09■□□□□ 0.65
USP15Q9Y4E8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP15Q9Y4E8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 KRT8P50-201ENST00000562022 1438 ntBASIC19.08■□□□□ 0.65
USP15Q9Y4E8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 HLA-J-201ENST00000462773 1622 ntBASIC19.08■□□□□ 0.65
USP15Q9Y4E8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 PRORSD1P-202ENST00000563365 2154 ntBASIC19.08■□□□□ 0.65
USP15Q9Y4E8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP15Q9Y4E8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.08■□□□□ 0.64
USP15Q9Y4E8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP15Q9Y4E8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP15Q9Y4E8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms