Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 HYMAI-201ENST00000635591 3347 ntBASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RCL1Q9Y2P8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 KRT16P1-201ENST00000399124 1418 ntBASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RCL1Q9Y2P8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 AC133041.1-202ENST00000642053 222 ntBASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 AL596257.1-201ENST00000641463 2694 ntBASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.52□□□□□ -0.09
RCL1Q9Y2P8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 AC060834.1-201ENST00000443027 2032 ntBASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 FLJ38576-201ENST00000623820 2459 ntBASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 AC079328.2-201ENST00000561241 3354 ntBASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 KRT17P3-201ENST00000420566 1262 ntBASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms