Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 FLJ13224-201ENST00000313737 1514 ntBASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 FER1L4-210ENST00000615531 5998 ntBASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 AL845331.1-201ENST00000424978 1190 ntBASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 KRT17P6-201ENST00000453795 1220 ntBASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 NFIC-211ENST00000641145 8399 ntBASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 KRT8P10-201ENST00000450021 1447 ntBASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 AP000997.3-201ENST00000623333 2250 ntBASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPH3AQ9Y2J0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 MINOS1P3-201ENST00000457048 203 ntBASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 AC112698.1-201ENST00000510299 916 ntBASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 AP005901.3-202ENST00000581653 237 ntBASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RPH3AQ9Y2J0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RPH3AQ9Y2J0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
RPH3AQ9Y2J0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPH3AQ9Y2J0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPH3AQ9Y2J0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RPH3AQ9Y2J0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPH3AQ9Y2J0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RPH3AQ9Y2J0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RPH3AQ9Y2J0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RPH3AQ9Y2J0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.27■□□□□ 0.19
RPH3AQ9Y2J0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms