Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SSX2IPQ9Y2D8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.07■□□□□ 0.64
SSX2IPQ9Y2D8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 AL499627.1-201ENST00000569373 2188 ntBASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 AC007613.1-201ENST00000572811 2597 ntBASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 AL049840.3-201ENST00000602669 611 ntBASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX2IPQ9Y2D8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 OR7E14P-202ENST00000530490 1290 ntBASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 SART3-203ENST00000546611 1184 ntBASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 CROCCP3-202ENST00000420820 1947 ntBASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSX2IPQ9Y2D8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 AC145285.3-201ENST00000564603 959 ntBASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 AC139530.3-201ENST00000620344 690 ntBASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.04■□□□□ 0.64
SSX2IPQ9Y2D8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 RPS2P1-201ENST00000434010 821 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms